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Published November 29, 2023 | Version v4.0.1
Software Open

Earl Grey

Authors/Creators

  • 1. Université de Neuchâtel
  • 2. University of Exeter

Description

Small bug fixes and improvements.

  • Patched issue with soft mask flag not being parsed properly
  • As the conda environment is now the recommended install, and by default uses the rmblast search engine, the number of threads given to Earl Grey by -t is now divided by 4 for all RepeatMasker steps, as RepeatMasker with rmblast uses number of threads multiplied by 4, as each process uses 4 threads.

Notes

If you use this software, please cite it using the metadata from this file.

Files

TobyBaril/EarlGrey-v4.0.1.zip

Files (3.7 MB)

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md5:5277e417896fc2b5a492bc7084b6c689
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Additional details

Related works

Is supplement to
Software: https://github.com/TobyBaril/EarlGrey/tree/v4.0.1 (URL)