nf-core

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Published November 13, 2023 | Version 2.7.1
Software Open

nf-core/ampliseq: Ampliseq Version 2.7.1

Authors/Creators

  • 1. QBiC
  • 2. National Bioinformatics Infrastructure Sweden (NBIS)
  • 3. Boehringer Ingelheim
  • 4. Linnaeus University & Stockholm University
  • 5. MemVerge
  • 6. Minderoo Foundation
  • 7. @NBISweden
  • 8. HUJI
  • 9. QBiC @qbicsoftware
  • 10. Lund University
  • 11. @seqeralabs | Stockholm
  • 12. @FredHutch
  • 13. Seqera Labs
  • 14. @seqeralabs
  • 15. Robert Bosch GmbH

Description

nf-core/ampliseq version 2.7.1 - 2023-11-13

Summary of changes

Downstream analysis with QIIME2 fails on some system with the most recent version of nextflow (23.10.0), this release fixes the issue.

Detailed changes

Changed

  • #657 - Improved parameter descriptions and sequence

Fixed

  • #655 - Added NUMBA_CACHE_DIR to fix downstream analysis with QIIME2 that failed on some systems
  • #656 - Moved conda-check to script-section and replaced exit 1 with error()
  • #657 - Corrected inaccurate reporting of QIIME2 taxonomic classifications and ASV length filtering

Files

nf-core/ampliseq-2.7.1.zip

Files (3.7 MB)

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md5:3dd7832546f0cee0c47bb3699181aea3
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Additional details

Related works

Is supplement to
Software: https://github.com/nf-core/ampliseq/tree/2.7.1 (URL)