Biodiversity Literature Repository

Submit to community
Liberated Data
Published October 19, 2023 | Version v1
Journal article Restricted

Taxonomy and phylogeny of Paradictyoarthrinium salsipaludicola sp. nov. (Paradictyoarthriniaceae, Pleosporales) from mangroves

Authors/Creators

  • 1. School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand. & Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. & hninnlay21.hl.zh@gmail.com; https://orcid.org/0000-0002-6652-6975
  • 2. Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. & cjprematunga@gmail.com; https://orcid.org/0009-0008-5521-5080
  • 3. Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. & phung.ausana@gmail.com; https://orcid.org/0000-0001-7929-2429
  • 4. Department of Botany and Microbiology, College of Science, King Saud University, PO Box 2455, Riyadh 11451, Kingdom of Saudi Arabia. & torperadgj@gmail.com; https://orcid.org/0000-0002-7286-5471
  • 5. School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand. & Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. & kandawatte.thi@mfu.ac.th; https://orcid.org/0000-0002-5816-9269

Description

Htet, Zin Hnin, Prematunga, Chasika, Mapook, Ausana, Jones, E.B. Gareth, Chethana, K.W. Thilini (2023): Taxonomy and phylogeny of Paradictyoarthrinium salsipaludicola sp. nov. (Paradictyoarthriniaceae, Pleosporales) from mangroves. Phytotaxa 620 (4): 283-292, DOI: 10.11646/phytotaxa.620.4.4, URL: http://dx.doi.org/10.11646/phytotaxa.620.4.4

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

URL
https://www.checklistbank.org/dataset/273559
LSID
urn:lsid:plazi.org:pub:FFFBFFDC7423FFEBC037A61B27649339
URL
http://publication.plazi.org/id/FFFBFFDC7423FFEBC037A61B27649339

Cites
Publication: 10.1515/bot.2010.074 (DOI)
Publication: 10.1007/s11676-009-0012-4 (DOI)
Publication: 10.1007/s13225-020-00468-0 (DOI)
Publication: 10.1007/s13225-016-0368-7 (DOI)
Publication: 10.5943/mycosphere/11/1/13 (DOI)
Publication: 10.1016/j.fitote.2018.11.004 (DOI)
Publication: 10.1111/j.1439-0485.1988.tb00196.x (DOI)
Publication: 10.1007/BF00029117 (DOI)
Publication: 10.1007/s13225-015-0351-8 (DOI)
Publication: 10.1007/s13225-015-0339-4 (DOI)
Publication: 10.1007/s13225-019-00426-5 (DOI)
Publication: 10.1139/b69-210 (DOI)
Publication: 10.11646/phytotaxa.393.3.2 (DOI)
Publication: 10.1021/acs.orglett.9b02906 (DOI)
Publication: 10.1093/oxfordjournals.molbev.a026092 (DOI)
Publication: 10.1007/s13225-015-0324-y (DOI)
Publication: 10.11646/phytotaxa.338.3.6 (DOI)
Publication: 10.1109/GCE.2010.5676129 (DOI)
Publication: 10.1007/s11852-010-0126-z (DOI)
Publication: 10.5943/mycosphere/10/1/9 (DOI)
Publication: 10.1111/j.1548-1352.2012.01262.x (DOI)
Publication: 10.1007/BF02338839 (DOI)
Publication: 10.5943/mycosphere/11/1/20 (DOI)
Publication: 10.1016/j.sajb.2021.04.031 (DOI)
Publication: 10.1086/332764 (DOI)
Publication: 10.1515/bot-2016-0107 (DOI)
Publication: 10.1128/jb.172.8.4238-4246.1990 (DOI)
Publication: 10.1016/B978-0-12-586450-3.50008-1 (DOI)
Publication: 10.1016/j.fitote.2018.02.031 (DOI)
Publication: 10.1016/B978-0-12-372180-8.50042-1 (DOI)
Publication: 10.5943/mycosphere/13/1/2 (DOI)
Publication: 10.1186/1471-2164-3-4 (DOI)
Has part
Taxonomic treatment: 10.5281/zenodo.10025153 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/03C287A47427FFEEC0BFA6EF27B591B4 (URL)
Dataset: 10.5281/zenodo.15157459 (DOI)
Figure: 10.5281/zenodo.10025208 (DOI)
Figure: 10.5281/zenodo.10025214 (DOI)
Figure: 10.5281/zenodo.10130526 (DOI)
Dataset: 10.5281/zenodo.15157461 (DOI)
Dataset: 10.5281/zenodo.15157463 (DOI)
Is source of
Dataset: https://www.gbif.org/dataset/e75b44a9-6be4-4721-a059-8182fa91fd0d (URL)

References

  • Buatong, J. (2010) Endophytic fungi producing antimicrobial substance from mangrove plants in the South of Thailand. Doctoral dissertation.
  • Chaeprasert, S., Piapukiew, J., Whalley, A.J. & Sihanonth, P. (2010) Endophytic fungi from mangrove plant species of Thailand: their antimicrobial and anticancer potentials. Botanica Marina 53: 555-564. https://doi.org/10.1515/bot.2010.074
  • Chaiwan, N., Gomdola, D., Wang, S., Monkai, J., Tibpromma, S., Doilom, M., Wanasinghe, D.N., Mortimer, P.E., Lumyong, S. & Hyde, K.D. (2021) An online database providing updated information of microfungi in the Greater Mekong Subregion. Mycosphere 12: 1513-1526. https://doi.org/10.1007/s11676-009-0012-4
  • Cheng, Z.S., Pan, J.H., Tang, W.C., Chen, Q.J. & Lin, Y.C. (2009) Biodiversity and biotechnological potential of mangrove-associated fungi. Journal of Forestry Research 20: 63-72. http://dx.doi.org/10.1007/s11676-009-0012-4
  • Devadatha, B., Jones, E.B.G., Pang, K.L., Abdel-Wahab, M.A., Hyde, K.D., Sakayaroj, J., Bahkali, A.H., Calabon, M.S., Sarma, V.V., Suetrong, S. & Zhang, S.N. (2021) Occurrence and geographical distribution of mangrove fungi. Fungal Diversity 106: 137-227. https://doi.org/10.1007/s13225-020-00468-0
  • Doilom, M., Dissanayake, A.J., Wanasinghe, D.N., Boonmee, S., Liu, J.K., Bhat, D.J., Taylor, J.E., Bahkali, A.H., McKenzie, E.H. & Hyde, K.D. (2017) Microfungi on Tectona grandis (teak) in Northern Thailand. Fungal Diversity 82: 107-182. https://doi.org/10.1007/s13225-016-0368-7
  • Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 1: 95-98.
  • Hongsanan, S., Hyde, K.D., Phookamsak, R., Wanasinghe, D.N., McKenzie, E.H.C., Sarma, V.V., Boonmee, S., Lucking, R., Bhat, D.J., Liu, N.G. & Tennakoon, D.S. (2020) Refined families of Dothideomycetes: Dothideomycetidae and Pleosporomycetidae. Mycosphere 11: 1553-2017. https://doi.org/10.5943/mycosphere/11/1/13
  • Hu, H.B., Luo, Y.F., Wang, P., Wang, W.J. & Wu, J. (2018) Xanthone-derived polyketides from the Thai mangrove endophytic fungus Phomopsis sp. xy21. Fitoterapia 131: 265-271. https://doi.org/10.1016/j.fitote.2018.11.004
  • Hyde, K.D. & Jones, E.B.G. (1988) Marine mangrove fungi. Marine Ecology 9: 15-33. https://doi.org/10.1111/j.1439-0485.1988.tb00196.x
  • Hyde, K.D. & Lee, S.Y. (1995) Ecology of mangrove fungi and their role in nutrient cycling: what gaps occur in our knowledge? Hydrobiologia 295: 107-118. https://doi.org/10.1007/BF00029117
  • Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, J., Buyck, B., Cai, L., Dai, Y.C., Abd-Elsalam, K.A., Ertz, D., Hidayat, I. & Jeewon, R. (2015) The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts. Fungal Diversity 74: 3-18. https://doi.org/10.1007/s13225-015-0351-8
  • Jones, E.B.G., Suetrong, S., Sakayaroj, J., Bahkali, A.H., Abdel-Wahab, M.A., Boekhout, T. & Pang, K.L. (2015) Classification of marine Ascomycota, Basidiomycota, Blastocladiomycota and Chytridiomycota. Fungal Diversity 73: 1-72. https://doi.org/10.1007/s13225-015-0339-4
  • Jones, E.B.G., Pang, K.L., Abdel-Wahab, M.A., Scholz, B., Hyde, K.D., Boekhout, T., Ebel, R., Rateb, M.E., Henderson, L., Sakayaroj, J., Suetrong, S., Dayarathne, M.C., Kumar, V., Raghukumar, S., Sridhar, K.R., Bahkali, A.H.A., Gleason, F.H. & Norphanphoun, C. (2019) An online resource for marine fungi. Fungal Diversity 96: 347-433. https://doi.org/10.1007/s13225-019-00426-5
  • Khrueayu, D. & Pilantanapak, A. (2012) Antifungal activity of bioactive compound from endophytic fungi isolated from mangrove leaves. In: 1st Mae Fah Luang University International Conference 7: 1-25.
  • Kohlmeyer, J. (1969) Marine fungi from Hawaii including the new genus Helicascus. Canadian Journal of Botany 47: 1469-1487. https://doi.org/10.1139/b69-210
  • Kumar, V., Cheewangkoon, R., Gentekaki, E., Maharachchikumbura, S.S., Brahmanage, R.S. & Hyde, K.D. (2019) Neopestalotiopsis alpapicalis sp. nov. a new endophyte from tropical mangrove trees in Krabi Province (Thailand). Phytotaxa 393: 251-262. https://doi.org/10.11646/phytotaxa.393.3.2
  • Lemmon, A.R., Brown, J.M., Stanger-Hall, K. & Lemmon, E.M. (2009) The effect of ambiguous data on phylogenetic estimates obtained by maximum likelihood and Bayesian inference. Systematic Biology 58: 130-145. https://doi.org/101093/sysbio/syp017
  • Li, W.S., Hu, H.B., Huang, Z.H., Yan, R.J., Tian, L.W. & Wu, J. (2019) Phomopsols A and B from the mangrove endophytic fungus Phomopsis sp. xy21: structures, neuroprotective effects, and biogenetic relationships. Organic Letters 21: 7919-7922. https://doi.org/10.1021/acs.orglett.9b02906
  • Liu, Y.J., Whelen, S. & Hall, B.D. (1999) Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit. Molecular Biology and Evolution 16: 1799-1808. https://doi.org/10.1093/oxfordjournals.molbev.a026092
  • Liu, J.K., Hyde, K.D., Jones, E.G., Ariyawansa, H.A., Bhat, D.J., Boonmee, S., Maharachchikumbura, S.S., McKenzie, E.H., Phookamsak, R., Phukhamsakda, C. & Shenoy, B.D. (2015) Fungal diversity notes 1-110: taxonomic and phylogenetic contributions to fungal species. Fungal Diversity 72: 1-197. https://doi.org/10.1007/s13225-015-0324-y
  • Liu, J.K., Luo, Z.L., Liu, N.G., Cheewangkoon, R. & To-Anun, C. (2018) Two novel species of Paradictyoarthrinium from decaying wood. Phytotaxa 338: 285-293. https://doi.org/10.11646/phytotaxa.338.3.6
  • Matsushima, T. (1996) Matsushima Mycological Memoirs 9. Matsushima Mycological Memoirs 9: 1-30.
  • Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In: 2010 Gateway Computing Environments Workshop (GCE). Presented at the 2010 Gateway Computing Environments Workshop (GCE), IEEE, New Orleans, LA, USA. pp. 1-8. https://doi.org/10.1109/GCE.2010.5676129
  • Nandy, S. & Kushwaha, S.P.S. (2011) Study on the utility of IRS 1D LISS-III data and the classification techniques for mapping of Sunderban mangroves. Journal of Coastal Conservation 15: 123-137. https://doi.org/10.1007/s11852-010-0126-z
  • Norphanphoun, C., Jayawardena, R.S., Chen, Y., Wen, T.C., Meepol, W. & Hyde, K.D. (2019) Morphological and phylogenetic characterization of novel pestalotioid species associated with mangroves in Thailand. Mycosphere 10: 531-578. https://doi.org/10.5943/mycosphere/10/1/9
  • Prabhugaonkar, A. & Bhat, D.J. (2011) New record of Megacapitula villosa and Paradictyoarthrinium diffractum from India. Mycosphere 2: 463-467.
  • Rambaut, A. (2012) FigTree v.1.40. University of Oxford. https://doi.org/10.1111/j.1548-1352.2012.01262.x
  • Rannala, B. & Yang, Z. (1996) Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. Journal of Molecular Evolution 43: 304-311. https://doi.org/10.1007/BF02338839
  • Senanayake, I.C., Rathnayaka, A.R., Marasinghe, D.S., Calabon, M.S., Gentekaki, E., Lee, H.B., Hurdeal, V.G., Pem, D., Dissanayake, L.S., Wijesinghe, S.N. & Bundhun, D. (2020) Morphological approaches in studying fungi: collection, examination, isolation, sporulation and preservation. Mycosphere 11: 2678-2754. https://doi.org/10.5943/mycosphere/11/1/20
  • Sopalun, K., Laosripaiboon, W., Wachirachaikarn, A. & Iamtham, S. (2021) Biological potential and chemical composition of bioactive compounds from endophytic fungi associated with Thai mangrove plants. South African Journal of Botany 141: 66-76. https://doi.org/10.1016/j.sajb.2021.04.031
  • Stamatakis, A. (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312-1313.
  • Stevens, F.L. (1920) New or noteworthy Porto Rican fungi. Botanical Gazette 70: 399-402. https://doi.org/10.1086/332764
  • Suetrong, S., Preedanon, S., Klaysuban, A., Gundool, W., Unagul, P., Sakayaroj, J., Promchu, W. & Sangtiean, T. (2017) Distribution and occurrence of manglicolous marine fungi from eastern and southern Thailand. Botanica Marina 60: 503-514. https://doi.org/10.1515/bot-2016-0107
  • Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238-4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990
  • Walsh, G.E. (1974) Mangroves: a review. In: Mold, R.J. (Ed.) Ecology of halophytes. Elsevier, pp. 51-174. https://doi.org/10.1016/B978-0-12-586450-3.50008-1
  • Wang, P., Yu, J.H., Zhu, K., Wang, Y., Cheng, Z.Q., Jiang, C.S., Dai, J.G., Wu, J. & Zhang, H. (2018) Phenolic bisabolane sesquiterpenoids from a Thai mangrove endophytic fungus, Aspergillus sp. xy02. Fitoterapia 127: 322-327. https://doi.org/10.1016/j.fitote.2018.02.031
  • White, T.J., Bruns, T., Lee, S.J.W.T. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications 18: 315-322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
  • Wijayawardene, N.N., Hyde, K.D., Dai, D.Q., Sanchez-Garcia, M., Goto, B.T. & Magurno, F. (2022) Outline of Fungi and fungus-like taxa -2021. Mycosphere 13: 53-453. https://doi.org/10.5943/mycosphere/13/1/2
  • Zhaxybayeva, O. & Gogarten, J.P. (2002) Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses. BMC Genomics 3: 1-15. https://doi.org/10.1186/1471-2164-3-4