Umbrella Data Management Plans to integrate FAIR data: lessons from the ISIDORe and BY-COVID consortia for pandemic preparedness
Authors/Creators
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David, Romain
(Contact person)1
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Richard, Audrey S.
(Project leader)1
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Connellan, Claire
(Project manager)1
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Lauer, Katharina B
(Researcher)2
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Chiusano, Maria Luisa
(Researcher)3, 4
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Goble, Carole
(Researcher)5
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Houde, martin
(Researcher)1
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Kemmer, Isabel
(Researcher)6, 7
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Keppler, Antje
(Researcher)8, 9
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Lieutaud, Philippe
(Other)10, 11, 12, 13
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Ohmann, Christian
(Researcher)14
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Panagiotopoulou, Maria
(Researcher)14
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Raza Khan, Sara
(Researcher)14
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Rybina, Arina
(Researcher)9, 8
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Soiland-Reyes, Stian
(Researcher)5
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Wit, Charlotte
(Researcher)15
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Wittner, Rudolf
(Researcher)16
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Andrade Buono, Rafael
(Researcher)17
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Arnaud Marsh, Sarah
(Researcher)18, 19, 20
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Audergon, Pauline
(Researcher)21
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Bonfils, Dylan
(Other)1
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Carazo, Jose-Maria
(Researcher)22, 23
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Charrel, Remi
(Researcher)24, 25, 12, 13
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Coppens, Frederik
(Researcher)17
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Fecke, Wolfgang
(Researcher)15
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Filippone, Claudia
(Researcher)1
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Garcia Alvarez, Eva
(Researcher)16
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Gul, Sheraz
(Researcher)26
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Hermjakob, Henning
(Work package leader)8, 27
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Herzog, Katja
(Researcher)15
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Holub, Petr
(Researcher)16
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Kozera, Lukasz
(Researcher)16
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Lister, Allyson L.
(Researcher)28
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López-Coronado, José
(Researcher)29
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Madon, Bénédicte
(Researcher)30, 31
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Majcen, Kurt
(Other)16
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Martin, William
(Researcher)32
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Müller, Wolfgang
(Researcher)33
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Papadopoulou, Elli
(Researcher)34, 35
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Prat, Christine M.A.
(Researcher)36, 11, 12, 13
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Romano, Paolo
(Researcher)37
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Sansone, Susanna-Assunta
(Researcher)28
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Saunders, Gary
(Researcher)38
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Blomberg, Niklas
(Researcher)2
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Ewbank, Jonathan
(Supervisor)1
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1.
European Research Infrastructure on Highly Pathogenic Agents
- 2. Elixir Hub
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3.
University of Naples Federico II
- 4. Stazione Zoologica Anton Dorhn
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5.
University of Manchester
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6.
Euro-BioImaging ERIC
- 7. EMBL
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8.
European Molecular Biology Laboratory
- 9. Eurobioimaging ERIC
- 10. European Virus Archive (EVA)
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11.
Aix-Marseille Université
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12.
Institut de Recherche pour le Développement
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13.
Inserm
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14.
European Clinical Research Infrastructure Network
- 15. EU-OPENSCREEN
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16.
Biobanking and Biomolecular Resources Research Infrastructure Consortium
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17.
VIB-UGent Center for Plant Systems Biology
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18.
Institut Pasteur
- 19. Genetics and Genomics of Insect Vectors Unit (Infravec)
- 20. Department of Anthropologie and Ecology of Disease Unit (Sonar-Global)
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21.
Instruct-ERIC
- 22. CNB-CSIC
- 23. Instruct-ES
- 24. European Virus Archive - GLOBAL
- 25. Aix Marseille Université
- 26. Fraunhofer Institute for Translational Medicine and Pharmacology ITMP
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27.
European Bioinformatics Institute
- 28. Oxford e-Research Centre
- 29. CECT-University of Valencia
- 30. Littoral, Environnement et Sociétés (LIENSs)
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31.
La Rochelle Université
- 32. European Vaccine Initiative
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33.
Heidelberg Institute for Theoretical Studies
- 34. ATHENA Research Center
- 35. OpenAIRE
- 36. European Virus Archive - GLOBAL (EVA-GLOBAL)
- 37. IRCCS Ospedale Policlinico San Martino
- 38. EATRIS ERIC
Description
The Horizon Europe project ISIDORe is dedicated to pandemic preparedness and responsiveness research. It brings together 17 Research Infrastructures (RIs) and networks to provide a broad range of services to infectious disease researchers. An efficient and structured treatment of data is central to ISIDORe's aim to furnish seamless access to its multidisciplinary catalogue of services, and to ensure that users' results are treated FAIRly. ISIDORe therefore requires a data management plan (DMP) covering both access management and research outputs, applicable over a broad range of disciplines, and compatible with the constraints and existing practices of its diverse partners.
In this poster, as an overview of a peer reviewed paper, we describe how, to achieve that aim, we undertook an iterative, step-by-step, process to build a community-approved living document, identifying good practices and processes, on the basis of use cases, presented as proof of concepts. International fora such as the RDA and EOSC, and primarily the BY-COVID project, furnished registries, tools and online data platforms, as well as standards, and the support of data scientists. Together, these elements provide a path for building an umbrella, FAIR-compliant DMP, aligned as fully as possible with FAIR principles, which could also be applied as a framework for data management harmonisation in other large-scale, challenge-driven projects. Finally, we discuss how data management and reuse can be further improved through the use of knowledge models when writing DMPs and, how, in the future, the contribution of an inter RIs data steward network, to produce a Community of Practice that could be integrated into planned trans-RI competence centres. We propose as a take home message how we will work in this inter RIs network, reusing outcomes from Research Data Alliance, on a multidisciplinary minimal requirement for metadata to enhance inter RIs FAIR data sharing for pandemic preparedness.
Files
26_RDAPlenary21_Umbrella_DMPpaper_PosterSalzburgv1_ZenodoDOI.pdf
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Additional details
Related works
- Is part of
- Preprint: 10.5281/zenodo.7516084 (DOI)
- Journal article: 10.5334/dsj-2023-035 (DOI)
Funding
Dates
- Submitted
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2023-10-19poster uploaded
References
- David, R., Richard, A.S., Connellan, C., Lauer, K.B., Chiusano, M.L., Goble, C., Houde, M., Kemmer, I., Keppler, A., Lieutaud, P., Ohmann, C., Panagiotopoulou, M., Khan, S.R., Rybina, A., Soiland-Reyes, S., Wit, C., Wittner, R., Buono, R.A., Marsh, S.A., Audergon, P., Bonfils, D., Carazo, J.-M., Charrel, R., Coppens, F., Fecke, W., Filippone, C., Alvarez, E.G., Gul, S., Hermjakob, H., Herzog, K., Holub, P., Kozera, L., Lister, A.L., López-Coronado, J., Madon, B., Majcen, K., Martin, W., Müller, W., Papadopoulou, E., Prat, C.M.A., Romano, P., Sansone, S.-A., Saunders, G., Blomberg, N. and Ewbank, J., 2023. Umbrella Data Management Plans to Integrate FAIR Data: Lessons From the ISIDORe and BY-COVID Consortia for Pandemic Preparedness. Data Science Journal, 22(1), p.35.DOI: https://doi.org/10.5334/dsj-2023-035