Published October 18, 2023
| Version v2.0.0
Software
Open
oberstal/pfGO: v2.0.0
Description
pfGO 2.0.0
This release of pfGO includes several updates to increase utility of output files/remove the need for manual parsing before downstream analyses. Several functions are updated to make automated retrieval/incorporation of latest PlasmoDB annotations for gene products and GO terms easy.
- Output files for significant genes in significant terms now include mapped GO terms, their definitions, enrichment values and interest-category
- Formatting fixes to all significant-genes-in-significant-terms output-files for easier downstream parsing.
- Functions pulling data from PlasmoDB.org now require manual URL entry to circumvent inconsistencies in link-structure
What's Changed
- Dev by @oberstal in https://github.com/oberstal/pfGO/pull/10
- Dev by @oberstal in https://github.com/oberstal/pfGO/pull/11
- updated package description by @oberstal in https://github.com/oberstal/pfGO/pull/12
Full Changelog: https://github.com/oberstal/pfGO/compare/v1.1.1...v2.0.0
Files
oberstal/pfGO-v2.0.0.zip
Files
(903.6 kB)
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md5:34968f278d155a362985844204ad04a2
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Additional details
Related works
- Is supplement to
- Software: https://github.com/oberstal/pfGO/tree/v2.0.0 (URL)