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Published October 10, 2023 | Version v1

Ancient diversity in host-parasite interaction genes in a model parasitic nematode

Authors/Creators

  • 1. Wellcome Sanger Institute

Description

Files associated with the "Ancient diversity in host-parasite interaction genes in a model parasitic nematode" manuscript. 

VCF files:

HB1_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz
HB2_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz
HB3_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz
HP1_vs_ngHelPoly1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz
HP2_vs_ngHelPoly1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz

H. mixtum genome assemblies:
Hm16_merged_spades_scaffolds.fa.gz
Hm2_merged_spades_scaffolds.fa.gz

Gene annotation files:
ngHelPoly1.1.primary.final_annotations.cds.fa.gz
ngHelPoly1.1.primary.final_annotations.gff3.gz
ngHelPoly1.1.primary.final_annotations.proteins.fa.gz

nxHelBake1.1.primary.final_annotations.cds.fa.gz
nxHelBake1.1.primary.final_annotations.gff3.gz
nxHelBake1.1.primary.final_annotations.proteins.fa.gz

Curated repeat libraries:
ngHelPoly1.1.repeats.01062023.fa.gz
nxHelBake1.1.repeats.01062023.fa.gz

Files

Files (497.7 MB)

Name Size
md5:9d89dfeb177003b7a5019ac26f0b96d5
5.1 MB Download
md5:5682d0afcd60b846546efe405cfb9821
7.1 MB Download
md5:e62bc102c6229851bb8302e39a51a3a9
3.9 MB Download
md5:96e987c296bcb5e38c5855b08ffeeff9
210.5 MB Download
md5:e45ff6db485c3311c37d3ca76ebfa537
209.5 MB Download
md5:a6ab1a0f93d9ec3086568d20db10f348
22.8 MB Download
md5:e216744c03e8f066f3c8472486f986c8
21.3 MB Download
md5:053a1eeb801fecf77c7a7a112a1fec0c
7.5 MB Download
md5:f3f2044a9df538e56e573059588f83a7
1.1 MB Download
md5:4b880826b47ea2e178a8d3489cd6977c
7.8 MB Download
md5:6c1f16d6dcf20c75d8a47985b0fd1e9e
1.2 MB Download