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Published September 26, 2023 | Version 0.1
Dataset Open

Datasets of the DIMet manuscript

Authors/Creators

  • 1. University of Bordeaux, CNRS, IBGC, UMR 5095, Bordeaux, France. Bordeaux Bioinformatic Center CBiB, University of Bordeaux, France
  • 2. University of Bordeaux, INSERM, BPH U1219, Bordeaux, France
  • 3. Bordeaux Bioinformatic Center CBiB, University of Bordeaux, France
  • 4. Data Processing and Analysis, Masaryk University, Brno, Czech Republic. Galaxy Europe
  • 5. University of Bordeaux, CNRS, IBGC, UMR 5095, Bordeaux, France
  • 6. University of Bordeaux, CNRS, IBGC, UMR 5095, Bordeaux, France.

Description

Datasets for reproducing the results of the manuscript "DIMet : An open-source tool for Differential analysis of targeted Isotope-labeled Metabolomics data". DIMet tool is available here, and the tool documentation is accessible in the DIMet wiki page and in its Galaxy site.

If running in command-line version, download, decompress it and follow the instructions of the documentation in the DIMet wiki page.

  Users of the Galaxy version of DIMet:

  • download and decompress (unzip) the .zip file.
  • within the 'datasets_manuscript_DIMet/' there is a sub-folder data/, preserve.
  • within 'datasets_manuscript_DIMet/' there is a sub-folder config/, the user can delete it as it is not used in the Galaxy version.
  • use the .csv files that are provided in data/ . The specific .csv files to be given as input are explained in each 'dimet_' module in Galaxy.

 

Files

datasets_manuscript_DIMet.zip

Files (662.5 kB)

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