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Published September 22, 2023 | Version 1.0

AutoMolDesigner for Antibiotic Discovery: An AI-based Open-source Software for Automated Design of Small-molecule Antibiotics

  • 1. Chinese Academy of Medical Sciences & Peking Union Medical College, Institute of Materia Medica
  • 2. Chinese Academy of Medical Sciences & Peking Union Medical College, Institute of Materia Medica; Jiangsu Ocean University
  • 3. Jiangsu Ocean University

Description

The files released here include:

  • The open-source software AutoMolDesigner V1.1 (GUI version). See AutoMolDesigner-GUI-{OS}-{Device}.zip. After decompression, the main program named AutoMolDesigner-GUI(.exe) at "AutoMolDesigner-GUI/program/" can be executed to launch the software. Pretrained and finetuned models for molecular generation are available at "AutoMolDesigner-GUI/program/working_dir/projects", and all datasets for molecular generation and molecular property prediction modeling are available at "AutoMolDesigner-GUI/program/working_dir/datasets".
  • The user manual for this software. See Manual.pdf.
  • Three trained molecular property prediction models that can be loaded into the software for new data prediction. See AutoGluon-Models.zip.

Files

Manual.pdf

Files (8.1 GB)

Name Size
md5:dc75aec3ecdb07df4025ab56976612f9
4.5 GB Preview Download
md5:18b3d32346cacff65eea2668b29d6bc4
424.9 MB Preview Download
md5:ecf51e9e75a2eb26f74b6a865eaee558
544.2 MB Preview Download
md5:4b1c236ef928021614e836ea7d1d921f
2.6 GB Preview Download
md5:98e041b187e4f03d65a9c6139080b7d8
1.9 MB Preview Download

Additional details

Related works

Is supplement to
Preprint: https://doi.org/10.1101/2023.09.27.559854 (Other)