Published September 13, 2023
| Version 1
Dataset
Open
JASPAR 2024 TFBS LOLA databases - Part 1
Authors/Creators
-
Ieva Rauluseviciute1
-
Rafael Riudavets Puig1
-
Romain Blanc-Mathieu2
-
Jaime Abraham Castro Mondragon1
-
Katalin Ferenc1
- Vipin Kumar1
-
Roza Berhanu Lemma1
-
Jérémy Lucas2
- Jeanne Chèneby3
- Damir Baranasic4
-
Aziz Khan5
-
Oriol Fornes6
- Sveinung Gundersen3
- Morten Johansen3
- Eivind Hovig3
- Boris Lenhard4
-
Albin Sandelin7
-
Wyeth W. Wasserman6
-
François Parcy2
-
Anthony Mathelier1
- 1. Center for Molecular Medicine Norway
- 2. Laboratoire Physiologie Cellulaire et Végétale, Univ. Grenoble Alpes
- 3. Center for Bioinformatics
- 4. MRC London Institute of Medical Sciences
- 5. Stanford Cancer Institute
- 6. Centre for Molecular Medicine and Therapeutics
- 7. Department of Biology and Biotech Research and Innovation Centre
Description
This repository contains the first part of the JASPAR 2024 LOLA databases used by the JASPAR TFBS enrichment tool. For each organism, we provide the LOLA databases for all JASPAR 2024 TFBS sets as compressed directories containing a set of .RDS R objects. Databases are organised by genome assembly.
The repository is split into different parts due to file sizes. Below are listed the different parts and the genome assemblies for which they have TFBSs:
Files
Files
(29.8 GB)
| Name | Size | |
|---|---|---|
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md5:44344f1d9428ffb93c9909e380a178c3
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2.1 GB | Download |
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md5:b004a07a4e0aef21d559e91a108f931b
|
275.8 MB | Download |
|
md5:611683e4433542c6529b867306b4efc8
|
275.8 MB | Download |
|
md5:5411a5bfa802d34bb0f613777d04f05c
|
419.6 MB | Download |
|
md5:9bb2e2eb37a67e19dda00118f7c1959d
|
25.8 GB | Download |
|
md5:6cd9fdde45b048c3dd51bf80035aab0b
|
848.7 MB | Download |
|
md5:7a074a72838890ee95c1f5cdaca5cbb1
|
39.8 MB | Download |