Spatiotemporal development of the human T follicular helper cell response to Influenza vaccination
- 1. St Jude Children's Research Hospital
- 2. Washington University School of Medicine
Description
The code that accompanies these data is available on GitHub.
Data
The two rds-format (R Data Serialization) files contain Seurat objects used for analyses.
intergrated_Tcells_harmony_bydonor.rds contains all T cells.
intergrated_Tfh_harmony_bydonor.rds is a subset of the previous file containing the TFH and Treg lineages.
Set2_10x_clones.tsv is paired TCR information for cells from the 10X experiment for all cells in intergrated_Tcells_harmony_bydonor.
TwoYear_LN_Bcell_freq_time.csv contains the B cell subset frequencies in the lymph node by time point.
Ali_paired_sc_clones_JCC283.tsv contains paired TCR sequences of cTFH and LN TFH cells obtained by single-cell sorting and target PCR.
Ali_bulk_allDonor_clones.tsv contains bulk TCR alpha and beta chains of sorted cTFH and LN TFH generated using a 5'-RACE protocol.
Notes
Files
Files
(6.5 GB)
| Name | Size | |
|---|---|---|
|
md5:b2440e13fa1ca968da83f3b65cf3d467
|
6.5 GB | Download |