Published August 21, 2023 | Version 0

Circulating hybrid cell dataset

Authors/Creators

  • 1. Oregon Health and Science University

Description

Peripheral blood mononuclear cell images for each region of interest (ROI). Each ROI .zip contains 3-channel, 96 by 96 pixel (0.325 mpp) single-cell .tiffs following the naming convention: "CG_{}_R1_{}_R2_{}_LABEL_{}_CENTROID_{}_{}.tiff". CG is the computational gating circulating hybrid cell call ("positive", "near", or "negative"), R1 is the number of positive votes received in annotation round 1 (0-7), R2 is the number of positive votes received in annotation round 2 (0-10), label is the cell's segmentation mask label, and centroid is the x/y coordinates of the cell centroid in the ROI. The marker order is [epithelial cocktail, CD45, DAPI]. 

Files

ROI_1.zip

Files (18.7 MB)

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