Published August 11, 2023
| Version v1
Dataset
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Hepatitis B surface antigen reduction is associated with hepatitis B core-specific CD8+ T cell quality
Authors/Creators
- 1. National Institute of Biomedical Innovation, Health and Nutrition, Japan
Description
The file containing post QC, count matrix, containing 6 samples as following.
(S01:CHBN001, S02:CHBN002, S03:CHBN003, S04:CHBN004, S12:CHBN005, S14:CHBN006.)
scRNAseq Libraries generated by 10xGenomics 5'-kit were read by NovaSeq 6000 platform.
After sequencing, raw reads were mapped to human generated by cellranger 6.1.2, then generated count matrix were subjected to QC according to Seurat manual (mitochondrial genes <10%, ribosomal genes > 0.05%), then SCT-transformed and integrated with 3000 features. Detail of QC/integration will be described in our manuscript.