Published August 9, 2023 | Version v1.0

Validation data for macromolecular occupancy estimation

  • 1. Karolinska Institute
  • 2. University of Oxford
  • 3. MRC-LMB

Description

Macromolecular densities used to validate OccuPy v0.1:

  1. Synthetic densities of pdb 1UXI with altered:
    • Occupancy of chain A
    • Occupancy of NAD cofactors 
    • Bfactor of chain A at occupancy 0.5 of chain A
  2. Reconstructions of rotavirus spike protein:
    • No selection for spike, subsets of various particle numbers 
    • Positive selection (enriched) for spike, subsets of various particle numbers

Files

subset_reconstructions.zip

Files (6.4 GB)

Name Size
md5:b2cafa0eb4bbb1c3f90bff08cfdcfb92
1.1 GB Preview Download
md5:fa62f2f481282ca96c3f7af71bec2f8e
5.3 GB Preview Download