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Published June 19, 2017 | Version v1

Gene co-ordinates, expression levels; SNP identifiers and functions for Drosophila melanogaster (Sussex LHM population)

Authors/Creators

  • 1. University of Sussex

Description

Data for SNP context information to add to GWAS results. Specifically, SNP functions, sex-bias in gene expression, official SNP idenfiers from NCBI dbSNP, and gene positions and names (from UCSC Genome Browswer). Most of the input files are on-line and their URLs are stated in the code (make_dmel_accessory_data.sh). Also includes code, logs, and exploratory graphs.

Files

drosophila_gene_lengths.png

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Additional details

Funding

European Commission
2SEXES_1GENOME - Sex-specific genetic effects on fitness and human disease 280632