Published July 10, 2023 | Version 1.0

WHiM-BC Dataset: Evolution of CSCs and non CSCs MCF-7 Migration in Wound Healing Assay

  • 1. University of Granada
  • 2. ROR icon Universidad de Granada
  • 3. Universidad de Sevilla

Description

The WHiM-BC Dataset has been utilized to train Deep Learning models for the prediction of migration capabilities of MCF-7 cells, facilitated by the Predicting Wound Healing Progress Framework (PWPF).

The software can be accessed on GitHub: https://github.com/frangam/wound-healing.

Or you can download from Zenodo: https://doi.org/10.5281/zenodo.8130984

The dataset comprises two distinct parts:

MCF-7 Monolayer Cells: This part includes photographs of 12 different wells taken at 0h, 3h, 6h, 9h, 12h, 24h, and 27h, marking the final time of wound closure.

MCF-7 Spheres: This portion of the dataset mirrors the first, with images of 12 wells captured at the following time intervals: 0h, 3h, 6h, 9h, 12h, and 15h, indicating the closure time.

The dataset consists of a total of (127) for the MCF-7 Monolayer Cells and (126) for the MCF-7 Spheres, amounting to a sum of photographs from both parts.

 

If you utilize this tool in your research, please acknowledge it by citing the following reference:



@article{Garcia-Moreno-PWPF,
  title={Using Deep Learning for Predicting the Dynamic Evolution of Breast Cancer Migration},
  author={Garcia-Moreno, Francisco Manuel and Ruiz-Espigares, Jesus and Marchal, Juan Antonio and Gutierrez-Naranjo, Miguel Angel},
  year={2024},
  journal={Computers in Biology and Medicine},
  doi={10.1016/j.compbiomed.2024.108890},
  note={\url{https://authors.elsevier.com/tracking/article/details.do?aid=108890&jid=CBM&surname=Garcia-Moreno}}
}

And also cite our MCF-7 Dataset used to train our software:


@misc{WHiM-BC_Dataset,
  title={WHiM-BC Dataset: Evolution of CSCs and non CSCs MCF-7 Migration in Wound Healing Assay},
  author={Garcia-Moreno, Francisco Manuel and Ruiz-Espigares, Jesus and Marchal, Juan Antonio and Gutiérrez-Naranjo, Miguel Ángel},
  year={2023},
  doi={10.5281/zenodo.8131123},
  url={https://doi.org/10.5281/zenodo.8131123},
  note = {version 1.0}
}

Files

WHiM-BC Dataset.zip

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