There is a newer version of the record available.

Published July 3, 2023 | Version 0.0.2

An assessment of acd_lotus for the structural dereplication of natural products using 13C NMR spectroscopy data.

Authors/Creators

  • 1. Université de Reims Champagne-Ardenne, France

Description

 A method that relies on carbon-13 nuclear magnetic resonance (NMR) spectroscopy, elaborated in earlier works of the author's research group, requires the availability of a dedicated database that establishes relationships between chemical structures, biological and chemical taxonomy, and spectroscopy. The construction of such a database, called acd_lotus, was reported earlier and its usefulness was only illustrated by three examples. This dataset provides the results of structure searches carried out starting from 58 carbon-13 NMR data sets recorded on compounds selected in the metabolomics section of BMRB, the biological magnetic resonance bank.

Correction in the JSON file of ascochitin.

Addition of a CSV file according to Schymanski and Bolton for the description of the selected compounds.

 

Notes

This data set constitutes the Supplementary material of a preprint deposited in ChemRXiv by Jean-Marc Nuzillard, entitled "Identification of known natural products by querying a carbon-13 nuclear magnetic resonance database — an assessment".

Files

compounds.csv

Files (866.6 kB)

Name Size Download all
md5:737dc3d618ca3fc7f31be6c638402159
6.8 kB Preview Download
md5:161b1b5302b715040eba6f74e7ab574c
60.4 kB Preview Download
md5:b54d27defa0c453daa5959674b7032c0
668.4 kB Preview Download
md5:fb0fd065285b7aaba4b78ba9e83663dc
130.9 kB Download

Additional details

Related works

Is cited by
Preprint: 10.26434/chemrxiv-2023-srzq4 (DOI)