Published June 29, 2023
| Version v1
Dataset
Open
High-resolution KIR allele annotations for HPRC 47 assemblies and other reference genomes using SKIRT
Authors/Creators
- 1. Graduate Institute of Medical Genomics and Proteomics, College of Medicine, National Taiwan University, Taipei, Taiwan
- 2. Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, Taiwan
- 3. Department of Medical Genetics, National Taiwan University Hospital, Taipei, Taiwan
- 4. Department of Biomechatronics Engineering, National Taiwan University, Taipei, Taiwan
Description
Leveraging the high-quality genome assemblies from the Human Pangenome Reference Consortium (HPRC), we present a novel bioinformatic tool, the Structural KIR annoTator (SKIRT), to annotate, identify, and discover hundreds of novel alleles, more than a dozen structural variations among KIR genes, and all haplotypes carrying novel alleles, confirming KIR genetic diversity. The use of HPRC data needs to comply with the rules announced by HPRC.
Files
Files
(1.3 GB)
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