Published June 23, 2023
| Version v1
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Host-associated genetic differentiation and origin of a recent host shift in the generalist parasitic weed Phelipanche ramosa
Authors/Creators
- 1. Agroécologie, INRAE, Institut Agro, Univ. Bourgogne Franche-Comté, F-21000 Dijon, France
- 2. Aristotle University of Thessaloniki, Faculty of Agriculture, Forestry and Natural Environment, 54124 Thessaloniki, Greece
Description
The branched broomrape, Phelipanche ramosa (L.) Pomel, is a parasitic weed that can infest several crops, notably tobacco, hemp and tomato. In western France, it has recently adapted to a new host, oilseed rape. We collected P. ramosa samples from fields cultivated with six different crops across Europe. Data from SSR markers and DNA sequences showed strong host-associated genetic differentiation.
File SSRdata-Pramosa1611.txt contains sampling locations, host crops and microsatellite genotypes.
Files BO1aligned.fas, ITSaligned.fas, RPL16aligned.fas and trnKtrnQaligned.fas contain aligned DNA sequences.
Files
SSRdata-Pramosa1611.txt
Files
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