Data from: Time dependent niche and fitness differences explain higher order species interactions – experimental evidence in plant-feeding arthropods
Authors/Creators
- 1. Adam Mickiewicz University in Poznań, Poland
- 2. Institute for Environmental Sciences, RPTU Kaiserslautern-Landau, 76829 Landau, Germany
Description
Filename: trajectories.csv
id: replicate identifier
variant: co-existence status ("competition" or "monoculture")
day: day of experiment
species: mite species ("CRM" or "WCM")
n: population density
Filename: model.RData
The GAMM fitted in R to population trajectories data.
Filename: sim.csv
day: day of experiment
spec_var: combination of co-existence status ("competition" or "monoculture") and species ("CRM" or "WCM")
10k population densities simulated from the fitted GAMM
Filename: NFD_over_time_monte_carlo_gam.py
Python script to compute niche and fitness differences. Takes sim.csv (densities over time for different instantiations) and model.RData ( stores the GAMM from R for the growth rates) as input and generates the file Data_NFD_monte_carlo_multi_c_new.csv which stores the niche and fitness differences computed for these communities.