Published June 10, 2023
| Version v1
Dataset
Open
Data Set "Protein network centralities as descriptor for QM region construction in QM/MM simulations of enzymes"
Description
This data set accompanies the publication "Efficient automatic construction of atom-economical QM regions with point-charge variation analysis" by Felix Brandt and Christoph R. Jacob (TU Braunschweig, Germany)
It contains:
- PDB files of the starting structures
- modified AMBER95 force field file
- AMS fragment files for the substrates and ions
- AMS input files for all geometry optimizations and single point calculations
- Python script for WISP and centrality analysis
Files
dataset_zenodo.zip
Files
(93.1 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:1a28d38caae4def1adb46eb9b5c3cf11
|
93.1 MB | Preview Download |