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Published June 4, 2023 | Version v1
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Custom R scripts and input files for manuscript "Evolutionary histories of breast cancer and related clones"

Authors/Creators

  • 1. Department of Pathology and Tumour Biology, Graduate School of Medicine, Kyoto University

Description

Supporting files for manuscript "Evolutionary histories of breast cancer and related clones".

Contents:

  • Custom R script and an input file (*.txt) to evaluate clonal structure of single-cell derived organoids using the Gaussian mixture models
  • Custom R script and an input file (*.txt) to estimate mutation rate in normal organoids using the linear regression models 
  • Custom R script and an input files (*.txt) to generate mutation matrices for phylogenetic analysis using MEGA and treemut 

Files

breast_evolution_analysis.zip

Files (12.7 MB)

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