Published November 2, 2022
| Version V1
Dataset
Open
Genome annotation file containing predicted genome features of Phytophthora agathidicida (Strain: 3770, Assembly:ASM2572299v1)
Authors/Creators
- 1. Laboratory of Molecular Plant Pathology/Bioprotection Aotearoa, School of Natural Sciences, Massey University, Palmerston North, New Zealand
- 2. Institute of Environmental Science and Research (ESR), Porirua, New Zealand
- 3. Scion, Rotorua, New Zealand
- 4. Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, United States
- 5. Laboratory of Molecular Plant Pathology/Bioprotection Aotearoa, School of Agriculture and Environment, Massey University, Palmerston North, New Zealand
- 6. School of Biological Sciences and Digital Life Institute, University of Auckland, Auckland, New Zealand
- 7. Bioprotection Aotearoa, School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand
- 8. Plant and Food Research, Lincoln, New Zealand
- 9. Plant and Food Research, Hawkes Bay, New Zealand
- 10. Horticultural Crops Disease and Pest Management Research Unit, USDA Agricultural Research Service, Corvallis, OR, United States
Description
This is the genome annotation file (gff3) containing predicted genome features of the Phytophthora agathidicida (Strain: 3770) genome published in Cox et al (2022). This annotation file is associated with the following entries at Genbank:
Assembly: ASM2572299v1
Biosample: SAMN19597867
BioProject: PRJNA734652
Included in the file are predicted functional annotations from Blastp search of all predicted proteins sequences against the Swiss-Prot sequence database (Release 23/02).
Files
Files
(12.9 MB)
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md5:bd23c1de10e400d5bc8ade41f848599e
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Additional details
References
- Cox et al (2022) . Chromosome-level assembly of the Phytophthora agathidicida genome reveals adaptation in effector gene families. doi.org/10.3389/fmicb.2022.1038444