Dataset Open Access
TMI cheese metagenomics sourmash output files
McDaniel, Elizabeth; Weiss, Emily; Dutton, Rachel; Borges, Adair; Reiter, Taylor
Sourmash output files from signature sketches, compare, gather, and taxonomy of time-series cheese metagenomes generated using both short- and long-read sequencing technologies. Originally generated as part of the pub "Paired long- and short-read metagenomics of cheese rind microbial communities at multiple time points". Analysis code of this data provided on Github at https://github.com/Arcadia-Science/metagenomics-of-cheese-rind-microbiomes.
To directly analyze this data, download and unzip the tarball. Clone the Github repository and point to the 2023-05-23-TMI-processed-data directory within a project using the `scripts/TMI-sourmash-explore.R` script. Install the packages used in the script if necessary.
| Name | Size | |
|---|---|---|
|
2023-05-23-TMI-processed-data.tar.gz
md5:5eaaf75d97c266153673c410666f5656 |
505.5 MB | Download |
| All versions | This version | |
|---|---|---|
| Views | 26 | 26 |
| Downloads | 5 | 5 |
| Data volume | 2.5 GB | 2.5 GB |
| Unique views | 20 | 20 |
| Unique downloads | 5 | 5 |
- Publication date:
- May 24, 2023
- DOI:
-
- Keyword(s):
- metagenomics
- License (for files):
- MIT License