Transposon DNA sequences facilitate the tissue-specific horizontal transfer of circulating tumor DNA between human cells
Authors/Creators
- 1. Department of Hematology and Medical Oncology, Winship Cancer Institute of Emory University
- 2. Kodikaz therapeutic solutions
- 3. Bioinformatics group, Institute of Molecular Biology NAS RA, Yerevan, Armenia
- 4. Division of hematology and oncology O'Neal Comprehensive Cancer Center, University of Alabama at Birmingham, Birmingham, AL
Description
The uploaded files are in the fasta format and are outputs from de novo assembly using the SGA algorithm (https://github.com/jts/sga). The description of the files are as below:
| Filename | description |
| 772.final.fa | Multiple Myeloma ctDNA |
| 54128-4M7.final.fa | Pancreatic cancer cells coculture with multiple myeloma ctDNA |
| 54128-6MP.final.fa | Multiple myeloma cells coculture with pancreatic cancer ctDNA |
| MIA-Cells.final.fa | Pancreatic cancer cells |
| MIA-cells-with-P201812-2.final.fa | Pancreatic cancer cells coculture with pancreatic cancer ctDNA |
| MM1S-cells.final.fa | Multiple Myeloma cells |
| MM1S-cells-with-772-2.final.fa | Mutiple myeloma cells coculture with Multiple myeloma ctDNA |
| P201812-2.final.fa | Pancreatic Cancer ctDNA |
Files
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Additional details
Funding
- National Institutes of Health
- Winship Cancer Institute Cancer Center Support Grant 2P30CA138292-04