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Published June 6, 2023 | Version 1.0.0

PDB70 Structural Library and Metadata

  • 1. Oak Ridge National Laboratory

Description

Protein structural library developed from the PDB70 sequence database as well as associated metadata for each structure. The structures associated with each entry in the PDB70 structural library are provided in a tar ball. When available, the metadata for a protein has been gathered from UniProtKB flat files. A focus is given to enzyme commission (EC) number informations as this type of ontology is of main focus for identifying and classifying enzymes within a proteome. 

Files

PDB70_structural_database_metadata.ipynb

Files (4.7 GB)

Name Size
md5:30569c5ab849c3758b7b71573931bd58
603.8 kB Download
md5:e54360a84113023fd744467a1e64b987
428.5 kB Download
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45.2 kB Preview Download
md5:565473bce09a07f8aefb7c0c51355366
3.9 GB Download
md5:990797f90b7f6db8564e87fd7d3b8120
427.4 MB Download
md5:45065db9f676b6ebdb45997745c2e4cc
279.6 MB Download
md5:731d4dee9b1db69a1cf978ef20972289
1.6 MB Download
md5:ba15c7e58735054a016bb45c916c0e69
3.0 MB Download
md5:05a52eb0df4042fcded4b4f3f26edf89
3.1 kB Download

Additional details

Related works

Is supplement to
Dataset: 10.13139/ORNLNCCS/1973885 (DOI)