Published May 12, 2023 | Version 1.0
Dataset Open

Gecarcinus lateralis - Comprehensive Multi-Tissue Transcriptome

Authors/Creators

  • 1. Department of Biology, Colorado State University
  • 2. Department of Biology, University of Oklahoma
  • 3. School of Science, Technology and Engineering, University of the Sunshine Coast

Description

Blackback land crab (Gecarcinus lateralis) comprehensive multi-tissue transcriptomic assemblies (nucleotide and amino acid) in FASTA format.

De novo assembled using a multi-assembler approach according to Perez-Moreno (et al., 2023) from ~ 1 billion Illumina RNAseq reads and a PacBio HiFi sequencing run from polyA selected libraries of the following tissues:

Y-Organ

Eyestalk Ganglia

Brain

Hepatopancreas

Heart

Gill

Hindgut

Midgut

 

 

References:

Jorge L Pérez-Moreno, Mihika T Kozma, Danielle M DeLeo, Heather D Bracken-Grissom, David S Durica, Donald L Mykles, CrusTome: A transcriptome database resource for large-scale analyses across Crustacea, G3 Genes|Genomes|Genetics, 2023;, jkad098, https://doi.org/10.1093/g3journal/jkad098

Files

Files (356.4 MB)

Name Size
md5:87543298fee817f7f36f533fc3703de0
86.3 MB Download
md5:d87276f46abff8d090d342a5dd9d87ea
270.1 MB Download

Additional details

References

  • Jorge L Pérez-Moreno, Mihika T Kozma, Danielle M DeLeo, Heather D Bracken-Grissom, David S Durica, Donald L Mykles, CrusTome: A transcriptome database resource for large-scale analyses across Crustacea, G3 Genes|Genomes|Genetics, 2023;, jkad098, https://doi.org/10.1093/g3journal/jkad098