Published May 11, 2023
| Version v1
Dataset
Open
Single particle tracking data for Sittewelle & Royle (2023)
Description
A project to analyse intracellular vesicle mobility.
A preprint of the manuscript is available at https://doi.org/10.1101/2023.05.10.540182
Code associated with the manuscript can be found at https://github.com/quantixed/p063p036
TrackMate XML files for:
- ATG9A, Clathrin, EB3, LAMP1, ML1N, Rab5, Rab11, Rab30, Rab35, SCAMP1, SCAMP3, TPD54
- TPD54 (pre and post bleach)
are available here together with some of the larger outputs from the code.
These TrackMate XML files can be processed using TrackMateR as described here or using the code associated with the manuscript. The folders contain calibration csv files which will correct the scaling where required during processing with TrackMateR.
Files
Archive.zip
Files
(1.2 GB)
| Name | Size | Download all |
|---|---|---|
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md5:50879fb89916ee46e703d39d303d1727
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1.2 GB | Preview Download |
Additional details
Related works
- Is cited by
- Preprint: 10.1101/2023.05.10.540182 (DOI)
- Is supplement to
- Software: https://github.com/quantixed/p063p036 (URL)
Funding
- UK Research and Innovation
- Intracellular Nanovesicles: their formation, transport and cargo BB/V003062/1