Published May 5, 2023 | Version v1
Dataset Open

SlumberNet: Deep learning classification of sleep stages using residual neural networks

  • 1. Department of Systems Pharmacology & Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA
  • 2. Akhilesh B. Reddy1

Description

Sleep research is fundamental to understanding health and well-being, as proper sleep is essential for maintaining optimal physiological function. Here we present SlumberNet, a novel deep learning model based on residual network (ResNet) architecture, designed to classify sleep states in mice using electroencephalogram (EEG) and electromyogram (EMG) signals. Our model was trained and tested on data from mice undergoing baseline sleep, sleep deprivation, and recovery sleep, enabling it to handle a wide range of sleep conditions. Employing k-fold cross-validation and data augmentation techniques, SlumberNet achieved high levels of accuracy (~98%) in predicting sleep stages and showed robust performance even with a small and diverse training dataset. Comparison of SlumberNet's performance to manual sleep stage classification revealed a significant reduction in analysis time (~50x faster), without sacrificing accuracy. Our study showcases the potential of deep learning to facilitate sleep research by providing a more efficient, accurate, and scalable method for sleep stage classification. Our work with SlumberNet demonstrates the power of deep learning in sleep research, and looking forward, SlumberNet could be adapted to human EEG analysis and sleep stage classification. Thus, SlumberNet could be a valuable tool in understanding both sleep physiology and disorders in mammals.

Files

final_model.zip

Files (24.1 GB)

Name Size Download all
md5:091621e71e91bd16dc53fda126e8c9c3
13.2 kB Download
md5:980e89e8b0798391f50fec6c3061f6da
15.9 kB Download
md5:43b16da4a24bda1e73ef69be6a1851b1
11.3 kB Download
md5:d13b3de981d85ca8509d5c4ddac3b0da
77.9 MB Preview Download
md5:414878db46794179fa76b6ea030a3e89
777.5 MB Preview Download
md5:906b541851e292d2aed683f9803e0805
23.2 GB Preview Download

Additional details

Related works

Is described by
Preprint: 10.1101/2023.05.03.539235 (DOI)