Published January 9, 2023
| Version v2
Dataset
Open
Single-cell atlases of two lophotrochozoan larvae highlight their complex evolutionary histories
Authors/Creators
- 1. Centre for Life's Origins and Evolution, Department of Genetics, Evolution and Environment, University College London, London, WC1E 6BT, United Kingdom.
- 2. Department of Biosciences, Durham University, United Kingdom.
- 3. Living Systems Institute, University of Exeter, Stocker Road, Exeter, United Kingdom.
- 4. Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA
- 5. CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Description
This archive contains all the code and data to reproduce the results of the associated manuscript: Piovani et al, "Single-cell atlases of two lophotrochozoan larvae highlight their complex evolutionary histories". We provide filtered scRNA-seq matrices, protein fasta files for each specie used to run SAMap and GenERA as well as the R-code used to generate the datasets and the jupyter notebook to generate SAMap results. In addition we provide the final Seurat objects and all analysis results which can be consulted without re-running the code.