Published April 17, 2023
| Version v1
Dataset
Open
Master Coral database used in USVI SCTLD Transmission Experiment Gene Expression Analysis
Description
The Master Coral Database fasta file is comprised of previously published genome-derived predicted gene models and transcriptomes spanning a wide diversity of coral families. Transcriptomes are from Davies et al., 2016 (doi: 10.3389/fmars.2016.00112), Kirk et al., 2018 (DOI: 10.1111/mec.14934); Moya et al., 2012 (doi: 10.1111/j.1365-294X.2012.05554.x); van de Water et al., 2018 (DOI: 10.1111/mec.14489).
Notes
Also funded by a NOAA OAR Cooperative Institutes award (#NA19OAR4320074).
Files
Files
(371.0 MB)
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md5:a52e853721a411badfcdcc072a5f15b4
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Additional details
Funding
- U.S. National Science Foundation
- RAPID: Collaborative Research: Predicting the Spread of Multi-Species Coral Disease Using Species Immune Traits 1927277
- U.S. National Science Foundation
- RAPID: Collaborative Research: Predicting the Spread of Multi-Species Coral Disease Using Species Immune Traits 1928761
- U.S. National Science Foundation
- RAPID: Collaborative Research: Predicting the Spread of Multi-Species Coral Disease Using Species Immune Traits 1928609
- U.S. National Science Foundation
- VI-EPSCoR: RII: Building Research Strength in the US Virgin Islands 0814417
- U.S. National Science Foundation
- RAPID: Collaborative Research: Predicting the Spread of Multi-Species Coral Disease Using Species Immune Traits 1928753
- U.S. National Science Foundation
- RII Track-1: Ridge to Reef Processes and Interdependent Drivers of Small Island Resilience 1946412
- U.S. National Science Foundation
- RAPID: Collaborative Research: Predicting the Spread of Multi-Species Coral Disease Using Species Immune Traits 1928817
- U.S. National Science Foundation
- RAPID: Collaborative Research: Predicting the Spread of Multi-Species Coral Disease Using Species Immune Traits 1928771
- U.S. National Science Foundation
- EAGER: Collaborative Research: Quantifying coral microbiome dynamics under change 1938112
- U.S. National Science Foundation
- A multi-scale approach to predicting infectious multi-host disease spread in marine benthic communities 2109622