Published April 2, 2023
| Version 1.3
Dataset
Open
geNomad database
Description
Marker database used by geNomad for virus and plasmid identification.
- genomad_db_v1.3.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's VMR number 19.
- genomad_hmm_v1.3.tar.gz: HMMER HMM models.
- genomad_metadata_v1.3.tsv.gz: Metadata for all the 227,897 markers.
- genomad_msa_v1.3.tar.gz: Multiple sequence alignments in FASTA format.
Files
Files
(5.0 GB)
| Name | Size | Download all |
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md5:ecda7f1b353431e97e0809a709124c92
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849.4 MB | Download |
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md5:e5e2039b88982c9f174cd149849c2157
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3.5 GB | Download |
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md5:b5ba673d5217834046a9894adce0f608
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6.8 MB | Download |
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md5:9b6da53aaf0fb3c0b205a2275bfbd622
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685.7 MB | Download |