GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis

Yufeng Gu; Arun Subramaniyan; Tim Dunn; Alireza Khadem; Kuan-Yu Chen; Somnath Paul; Md Vasimuddin; Sanchit Misra; David Blaauw; Satish Narayanasamy; Reetuparna Das

doi:10.1145/3579371.3589060

Published June 17, 2023 | Version 1.1

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GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis

1. University of Michigan - Ann Arbor
2. Illumina Inc.
3. University of Michigan-Ann Arbor
4. Intel Corporation

This artifact contains the code and instructions for paper: "GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis" in International Symposium on Computer Architecture (ISCA), 2023.

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Created: April 2, 2023
Modified: April 2, 2023

GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis

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GenDP.zip

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