Published February 27, 2023 | Version v1

Chemically Transferable Generative Backmapping of Coarse-Grained Proteins

  • 1. MIT

Description

Training, test datasets of the paper "Chemically Transferable Generative Backmapping of Coarse-Grained Proteins".

The PDB files are downloaded from PED [1] and processed according to the instruction described in our paper [link]. 

 

[1] PED in 2021: a major update of the Protein Ensemble Database for intrinsically disordered proteins

Lazar, T., Martı́nez-Pérez, E., Quaglia, F., Hatos, A., Chemes, L.B., Iserte, J.A., Méndez, N.A., Garrone, N.A., Saldaño, T.E., Marchetti, J., Velez Rueda, A.J., Bernadó, P., Blackledge, M., Cordeiro, T.N., Fagerberg, E., Forman-Kay, J.D., Fornasari, M.S., Gibson, T.J., Gomes, G-N.W., Gradinaru, C.C., Head-Gordon, T., Ringkjøbing Jensen, M., Lemke, E.A., Longhi, S., Marino-Buslje, C., Minervini, G., Mittag, T., Monzon, A.M., Pappu, R.V., Parisi, G., Ricard-Blum, S., Ruff, K.M., Salladini, E., Skepö, M., Svergun, D., Vallet, S.D., Varadi, M., Tompa, P., Tosatto, S.C.E., Piovesan D.

(2021) Nucleic Acids Research, Database Issue, PubMed linkNAR link

 

 

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