Published February 16, 2023 | Version 1.0.0

ShiftCrypt training data set for training ConforMine

  • 1. Interuniversity Institute of Bioinformatics in Brussels, ULB-VUB, Brussels, Belgium
  • 2. Interuniversity Institute of Bioinformatics in Brussels, ULB-VUB, Brussels 1050, Belgium

Description

Data set containing the ShiftCrypt values of the proteins used for training ConforMine. This set is not to be confused the the Molecular Dynamics (MD) data set, also used for training of this model. 

The data set also contains a python script which recreates the filtering of sequences performed in the training steps of ConforMine, which discards all proteins for which no valid ShiftCrypt predictions were obtained. 

Files

conformine_shiftcrypt_dataset.zip

Files (7.0 MB)

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Additional details

Funding

European Commission
RNAct - Enabling proteins with RNA recognition motifs for synthetic biology and bio-analytics. 813239