Published February 7, 2023
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Interesting Botryosphaeria (Botryosphaeriaceae) associated with Magnolia species in Thailand: Additions of two new host records with their lifestyles
Authors/Creators
- 1. Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & Research Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & nimalindeewari@gmail.com; https://orcid.org/0000-0002-1577-280X
- 2. University of Lisbon, Faculty of Sciences, Biosystems and Integrative Sciences Institute (BioISI), Campo Grande, 1749-016 Lisbon, Portugal & alan.jl.phillips@gmail.com; https://orcid.org/0000-0001-6367-9784
- 3. Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & Research Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & danushkasandaruwanatm@gmail.com; https://orcid.org/0000-0003-2306-1255
- 4. Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & Research Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & jaturong_yai@hotmail.com; https://orcid.org/0000-0002-3673-6541
- 5. Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & Research Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & suwan.462@gmail.com; https://orcid.org/0000-0002-2653-1913
- 6. Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & Research Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & Academy of Science, Royal Society of Thailand, Bangkok 10300, Thailand & saisamorn.l@cmu.ac.th; https://orcid.org/0000-0002-6485-414X
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De Silva, Nimali I., Phillips, Alan J.L., Tennakoon, Danushka S., Kumla, Jaturong, Suwannarach, Nakarin, Lumyong, Saisamorn (2023): Interesting Botryosphaeria (Botryosphaeriaceae) associated with Magnolia species in Thailand: Additions of two new host records with their lifestyles. Phytotaxa 583 (3): 227-240, DOI: 10.11646/phytotaxa.583.3.1, URL: http://dx.doi.org/10.11646/phytotaxa.583.3.1
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- urn:lsid:plazi.org:pub:FFBC2D74FFEBFFC338759B0D9A325405
References
- Abdollahzadeh, J., Zare, R. & Phillips, A.J. (2013) Phylogeny and taxonomy of Botryosphaeria and Neofusicoccum species in Iran, with description of Botryosphaeria scharifii sp. nov. Mycologia 105: 210-220. https://doi.org/10.3852/12-107
- Alves, A., Correia, A., Luque, J. & Phillips, A. (2004) Botryosphaeria corticola, sp. nov. on Quercus species, with notes and description of Botryosphaeria stevensii and its anamorph, Diplodia mutila. Mycologia 96: 598-613. https://doi.org/10.1080/15572536.2005.11832956
- Ariyawansa, H.A., Hyde, K.D., Liu, J.K., Wu, S.P. & Liu, Z.Y. (2016) Additions to karst Fungi 1: Botryosphaeria minutispermatia sp. nov., from Guizhou Province, China. Phytotaxa 275 (1): 35-44. https://doi.org/10.11646/phytotaxa.275.1.4
- Barr, M.E. (1972) Preliminary studies on the Dothideales in temperate North America. Contributions from the University of Michigan Herbarium 9: 523-638.
- Barr, M.E. (1987) Prodromus to Class Loculoascomycetes. University of Massachusetts, Amherst, MA.
- Carbone, I. & Kohn, L.M. (1999) A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91: 553-556. https://doi.org/10.1080/00275514.1999.12061051
- Cesati, V. & De Notaris, G. (1863) Schema di classificazione degli sferiacei italici aschigeri piu' omeno appartenenti al genere Sphaeria nell'antico significato attribuitoglide Persoon. Commentario della Societa Crittogamologica Italiana 14: 177-240.
- Chen, Y.Y., Dissanayake, A.J., Liu, Z.Y. & Liu, J.K.J. (2020) Additions to Karst Fungi 4: Botryosphaeria spp. associated with woody hosts in Guizhou province, China including B. guttulata sp. nov. Phytotaxa 454 (3): 186-202. https://doi.org/10.11646/phytotaxa.454.3.2
- Crous, P.W., Slippers, B., Wingfield, M.J., Rheeder, J., Marasas, W.F.O., Phillips, A., Alves, A., Burgess, T.I., Barber, P.A. & Groenewald, J.Z. (2006) Resolving phylogenetic lineages in the Botryosphaeriaceae. Studies in Mycology 55: 235-253. https://doi.org/10.3114/sim.55.1.235
- Darge,W.A. &Woldemariam, S.S. (2021) Botryosphaeria tree fungal pathogens and their diversity. International Journal of Phytopathology 10: 49-56. https://doi.org/10.33687/phytopath.010.01.3447
- Desprez-Loustau, M.L., Marcais, B., Nageleisen, L.M., Piou, D. & Vannini, A. (2006) Interactive effects of drought and pathogens in forest trees. Annals of Forest Science 63: 597-612. https://doi.org/10.1051/forest:2006040
- Dissanayake, A.J., Phillips, A.J.L., Hyde, K.D. & Li, X.H. (2016) Botryosphaeriaceae: Current status of genera and species. Mycosphere 7: 1001-1073. https://doi.org/10.5943/mycosphere/si/1b/13
- Dou, Z.P., Zhao, L., He, W. & Zhang, Y. (2021) Two novel species of Botryosphaeria causing stem canker of blueberries from China. Mycosystema 40: 473-486. https://doi.org/10.13346/j.mycosystema.200333
- Farr, D.F. & Rossman, A.Y. (2022) Fungal Databases, U.S. National Fungus Collections, ARS, USDA. Available from: https://nt.ars-grin. gov/fungaldatabases/ (accessed 19 September 2022)
- Glass, N.L. & Donaldson, G.C. (1995) Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Applied and Environmental Microbiology 61: 1323-1330. https://doi.org/10.1128/aem.61.4.1323-1330.1995
- Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 1999 41: 95-98.
- Hara, K. (1930) Pathologia Agriculturalis Plantarum. Yokendo, Tokyo, pp. 481-483. [in Japanese]
- Hattori, Y., Ando, Y., Sasaki, A., Uechi, N. & Nakashima, C. (2021) Taxonomical study of noteworthy species of Botryosphaeria in Japan. Mycobiology 49: 122-132. https://doi.org/10.1080/12298093.2021.1895486
- Hsieh, W. & Chen, C. (1994) Sivanesania, a new botryosphaeriaceous ascomycete genus on Rubus from Taiwan. Mycological Research 98: 44-46.
- Huelsenbeck, J.P. & Ronquist, F. (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755. https://doi.org/10.1093/bioinformatics/17.8.754
- Inderbitzin, P., Bostock, R.M., Trouillas, F.P. & Michailides, T.J. (2010) A six-locus phylogeny reveals high species diversity in Botryosphaeriaceae from California almond. Mycologia 102: 1350-1368. https://doi.org/10.3852/10-006
- Index Fungorum (2022) Available from: http://www.indexfungorum.org/names/names.asp (accessed 30 September 2022)
- Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, J., Buyck, B., Cai, L., Dai, Y.C., Abd Elsalam, K.A., Ertz, D., Hidayat, I., Jeewon, R., Jones, E.B.G., Bahkali, A.H., Karunarathna, S.C., Liu, J.K., Luangsa-ard, J.J., Lumbsch, H.T., Maharachchikumbura, S.S.N., McKenzie, E.H.C., Moncalvo, J.M., Ghobad-Nejhad, M., Nilsson, H., Pang, K., Pereira, O.L., Phillips, A.J.L., Raspe, O., Rollins, A.W., Romero, A.I., Etayo, J., Selcuk, F., Stephenson, S.L., Suetrong, S., Taylor, J.E., Tsui, C.K.M., Vizzini, A., Abdel-Wahab, M.A., Wen, T.C., Boonmee, S., Dai, D.Q., Daranagama, D.A., Dissanayake, A.J., Ekanayaka, A.H., Fryar, S.C., Hongsanan, S., Jayawardena, R.S., Li, W.J., Perera, R.H., Phookamsak, R., De Silva, N.I., Thambugala, K.M., Tian, Q., Wijayawardene, N.N., Zhao, R.L., Zhao, Q., Kang, J.C. & Promputtha, I. (2015) The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts. Fungal Diversity 74: 3-18. https://doi.org/10.1007/s13225-015-0351-8
- Lazzizera, C., Frisullo, S., Alves, A. & Phillips, A.J.L. (2008) Morphology, phylogeny and pathogenicity of Botryosphaeria and Neofusicoccum species associated with drupe rot of olives in southern Italy. Plant Pathology 57: 948-956. https://doi.org/10.1111/j.1365-3059.2008.01842.x
- Li, G.Q., Liu, F.F., Li, J.Q., Liu, Q.L. & Chen, S.F. (2018) Botryosphaeriaceae from Eucalyptus plantations and adjacent plants in China. Persoonia-Molecular Phylogeny and Evolution of Fungi 40: 63-95. https://doi.org/10.3767/persoonia.2018.40.03
- Li, G.Q., Slippers, B., Wingfield, M.J. & Chen, S.F. (2020) Variation in Botryosphaeriaceae from Eucalyptus plantations in Yunnan Province in southwestern China across a climatic gradient. IMA Fungus 11: 1-49. https://doi.org/10.1186/s43008-020-00043-x
- Liu, J.K., Phookamsak, R., Doilom, M., Wikee, S., Li, Y.M., Ariyawansha, H., Boonmee, S., Chomnunti, P., Dai, D.Q., Bhat, J.D. & Romero, A.I. (2012) Towards a natural classification of Botryosphaeriales. Fungal Diversity 57: 149-210. https://doi.org/10.1007/s13225-012-0207-4
- Mehl, J.W., Slippers, B., Roux, J. & Wingfield, M.J. (2017) Overlap of latent pathogens in the Botryosphaeriaceae on a native and agricultural host. Fungal Biology 121: 405-419. https://doi.org/10.1016/j.funbio.2016.07.015
- Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In Gateway Computing Environments Workshop (GCE): 1-8. https://doi.org/10.1109/GCE.2010.5676129
- Miura, M. (1917) Ringo no Byoki. Shokabo, Tokyo, pp. 106-109. [in Japanese]
- Moral, J., Morgan D., Trapero A. & Michailides, T.J. (2019) Ecology and epidemiology of diseases of nut crops and olives caused by Botryosphaeriaceae fungi in California and Spain. Plant Disease 103: 1809-1827. https://doi.org/10.1094/PDIS-03-19-0622-FE
- Nose, T. (1933) On the ring rot of pears and the causal organism, especially on its perfect generation Physalospora piricola. Annals of the Agricultural Experiment Station 7: 156-163. [in Japanese]
- Pennycook, S.R. & Samuels, G.J. (1985) Botryosphaeria and Fusicoccum species associated with ripe fruit rot of Actinidia deliciosa (Kiwifruit) in New Zealand. Mycotaxon 24: 445-458.
- Phillips,A.J.L., Alves,A., Abdollahzadeh, J., Slippers, B., Wingfield, M.J., Groenewald, J.Z. & Crous, P.W. (2013) The Botryosphaeriaceae: genera and species known from culture. Studies in Mycology 55: 53-63. https://doi.org/10.3114/sim0021
- Phillips, A.J.L., Alves, A., Pennycook, S.R., Johnston, P.R., Ramaley, A., Akulov, A. & Crous, P.W. (2008) Resolving the phylogenetic and taxonomic status of darkspored teleomorph genera in the Botryosphaeriaceae. Persoonia 21: 29-55. https://doi.org/10.3767/003158508X340742
- Phillips, A.J., Hyde, K.D., Alves, A. & Liu, J.K. (2019) Families in Botryosphaeriales: a phylogenetic, morphological and evolutionary perspective. Fungal Diversity 94: 1-22. https://doi.org/10.1007/s13225-018-0416-6
- Posada, D. & Crandall, K.A. (1998) Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818. https://doi.org/10.1093/bioinformatics/14.9.817
- Qiu, Y., Savocchia, S., Steel, C.C. & Ash, G.J. (2008) Botryosphaeria dothidea associated with grapevine trunk disease in south-eastern Australia. Australasian Plant Pathology 37: 482-485. https://doi.org/10.1071/AP08045
- Rambaut, A. & Drummond, A. (2008) FigTree: Tree figure drawing tool, version 1.2. 2. Institute of Evolutionary Biology, University of Edinburgh.
- Senanayake, I.C., Rathnayaka, A.R., Marasinghe, D.S., Calabon, M.S., Gentekaki, E., Lee, H.B., Hurdeal, V.G., Pem, D., Dissanayake, L.S., Wijesinghe, S.N. & Bundhun, D. (2020) Morphological approaches in studying fungi: Collection, examination, isolation, sporulation and preservation. Mycosphere 11: 2678-2754. https://doi.org/10.5943/mycosphere/11/1/20
- Shoemaker, R.A. (1964) Conidial states of some Botryosphaeria species on Vitis and Quercus. Canadian Journal of Botany 42: 1297- 1301. https://doi.org/10.1139/b64-12
- Slippers, B., Boissin, E., Phillips, A.J.L., Groenewald, J.Z., Wingfield, M.J., Postma A., Burgess, T. & Crous, P.W. (2013). Phylogenetic lineages in the Botryosphaeriales: A systematic and evolutionary framework. Studies in Mycology 76: 31-49. https://doi.org/10.3114/sim0020
- Slippers, B., Johnson, G.I. & Crous, P.W. (2005) Phylogenetic and morphological reevaluation of the Botryosphaeria species causing diseases of Mangifera indica. Mycologia 97: 99-110. https://doi.org/10.1080/15572536.2006.11832843
- Slippers, B., Crous, P.W., Denman, S., Coutinho, T.A., Wingfield, B.D. & Wingfield, M.J. (2004) Combined multiple gene genealogies and phenotypic characters differentiate several species previously identified as Botryosphaeria dothidea. Mycologia 96: 83-101. https://doi.org/10.1080/15572536.2005.11833000
- Slippers, B., Roux, J., Wingfield, M.J., Van der Walt, F.J.J., Jami, F., Mehl, J.W.M. & Marais, G.J. (2014) Confronting the constraints of morphological taxonomy in the Botryosphaeriales. Persoonia-Molecular Phylogeny and Evolution of Fungi 33: 155-168. https://doi.org/10.3767/003158514X684780
- Slippers, B. & Wingfield, M.J. (2007) Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact. Fungal Biology Reviews 21: 90-106. https://doi.org/10.1016/j.fbr.2007.06.002
- Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. https://doi.org/10.1093/bioinformatics/btl446
- Stamatakis, A., Hoover, P. & Rougemont, J. (2008) A rapid bootstrap algorithm for the RAxML web servers. Systematic Biology 57: 758-771. https://doi.org/10.1080/10635150802429642
- Taylor, K., Barber, P.A., Hardy, G.E.S.J. & Burgess, T.I. (2009) Botryosphaeriaceae from tuart (Eucalyptus gomphocephala) woodland, including descriptions of four new species. Mycological Research 113: 337-353. https://doi.org/10.1016/j.mycres.2008.11.010
- Theissen, F. & Sydow, H. (1915) Die Dothideales. Kritischsystematische Originalunter suchungen (Continuatio). Annales Mycologici 13: 431-746.
- Theissen, F. & Sydow, H. (1918) Vorentw¸rfe zu den Pseudosphaeriales. Annales Mycologici 16: 1-34.
- Trakunyingcharoen,T., Lombard,L., Groenewald,J.Z., Cheewangkoon,R.,To-Anun,C.&Crous,P.W.(2015)Caulicolous Botryosphaeriales from Thailand. Persoonia-Molecular Phylogeny and Evolution of Fungi 34: 87-99. https://doi.org/10.3767/003158515X685841
- von Hohnel, F. (1909) Fragmente zur Mykologie (VII. Mitteilung, Nr. 289 bis 353). Sitzungsberichte der Kaiserlichen Akademie der Wissenschaften. Mathematisch-Naturwissenschaftliche Classe 1118: 813-904
- White, T.J., Bruns, T., Lee, S.J.W.T. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & White, T.J. (Eds.) PCR Protocols: a guide to methods and applications. Academic Press, San Diego, CA, USA, pp. 315-322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
- Wijayawardene, N.N., Hyde, K.D., Wanasinghe, D.N., Papizadeh, M., Goonasekara, I.D., Camporesi, E., Bhat, D.J., McKenzie, E.H., Phillips, A.J., Diederich, P. & Tanaka, K. (2016) Taxonomy and phylogeny of dematiaceous coelomycetes. Fungal Diversity 77: 1-316. https://doi.org/10.1007/s13225-016-0360-2
- Xu, C., Wang, C., Ju, L., Zhang, R., Biggs, A.R., Tanaka, E., Li, B. & Sun, G. (2015) Multiple locus genealogies and phenotypic characters reappraise the causal agents of apple ring rot in China. Fungal Diversity 71: 215-231. https://doi.org/10.1007/s13225-014-0306-5
- Yamada, K.D., Tomii, K. & Katoh, K. (2016) Application of the MAFFT sequence alignment program to large data-reexamination of the usefulness of chained guide trees. Bioinformatics 32: 3246-3251. https://doi.org/10.1093/bioinformatics/btw412
- Zhang,W., Groenewald,J.Z., Lombard, L., Schumacher,R.K., Phillips,A.J.L. & Crous, P.W. (2021) Evaluating species in Botryosphaeriales. Persoonia-Molecular Phylogeny and Evolution of Fungi 46: 63-115. https://doi.org/10.3767/persoonia.2021.46.03
- Zhou, Y., Dou, Z., He, W., Zhang, X. & Zhang, Y. (2016) Botryosphaeria sinensia sp. nov., a new species from China. Phytotaxa 245 (1): 43-50. https://doi.org/10.11646/phytotaxa.245.1.4
- Zhou, Y.P., Zhang, M., Dou, Z.P. & Zhang, Y. (2017) Botryosphaeria rosaceae sp. nov. and B. ramosa, new botryosphaeriaceous taxa from China. Mycosphere 8: 162-171. https://doi.org/10.5943/mycosphere/8/2/2