Published January 30, 2023
| Version v1.1.0
Software
Open
epiforecasts/scoringutils: scoringutils version 1.1.0
Authors/Creators
- 1. London School of Hygiene and Tropical Medicine
- 2. @epiforecasts @cmmid
- 3. data.org
- 4. London School of Hygiene & Tropical Medicine
- 5. UMass-Amherst
Description
A minor update to the package with some bug fixes and minor changes.
Feature updates Package updates- Removed the on attach message which warned of breaking changes in
1.0.0. - Renamed the
metricargument ofsummarise_scores()torelative_skill_metric. This argument is now deprecated and will be removed in a future version of the package. Please use the new argument instead. - Updated the documentation for
score()and related functions to make the soft requirement for amodelcolumn in the input data more explicit. - Updated the documentation for
score(),pairwise_comparison()andsummaris_scores()to make it clearer what the unit of a single forecast is that is required for computations - Simplified the function
plot_pairwise_comparison()which now only supports plotting mean score ratios or p-values and removed the hybrid option to print both at the same time.
- Missing baseline forecasts in
pairwise_comparison()now trigger an explicit and informative error message. - The requirements table in the getting started vignette is now correct.
- Added support for an optional
samplecolumn when using a quantile forecast format. Previously this resulted in an error.
- Fix 223 issue with add_coverage by @seabbs in https://github.com/epiforecasts/scoringutils/pull/234
- Test explicitly on minimum supported R version by @Bisaloo in https://github.com/epiforecasts/scoringutils/pull/236
- use deparse instead of deparse1 by @nikosbosse in https://github.com/epiforecasts/scoringutils/pull/237
- Specify which column name clashes with metrics by @Bisaloo in https://github.com/epiforecasts/scoringutils/pull/239
- Fix separate results by @nikosbosse in https://github.com/epiforecasts/scoringutils/pull/243
- fix pit histogram plot in #240 by @nikosbosse in https://github.com/epiforecasts/scoringutils/pull/247
- Fix requirements table in getting-started vignette by @damonbayer in https://github.com/epiforecasts/scoringutils/pull/249
- Reformatting to comply with JSS requirements by @nikosbosse in https://github.com/epiforecasts/scoringutils/pull/251
- Fix ggplot2 update by @nikosbosse in https://github.com/epiforecasts/scoringutils/pull/252
- update test by @nikosbosse in https://github.com/epiforecasts/scoringutils/pull/254
- don't error if baseline model is not present by @sbfnk in https://github.com/epiforecasts/scoringutils/pull/250
- 1.1.0 by @seabbs in https://github.com/epiforecasts/scoringutils/pull/258
- add infra for develop branch by @seabbs in https://github.com/epiforecasts/scoringutils/pull/259
- Issue 248 by @seabbs in https://github.com/epiforecasts/scoringutils/pull/256
- Documentation: Update README by @seabbs in https://github.com/epiforecasts/scoringutils/pull/262
- Docmentation: update score and related documentation to mention the model column by @seabbs in https://github.com/epiforecasts/scoringutils/pull/260
- Feature: add enhanced treatment of sample as a protected column by @seabbs in https://github.com/epiforecasts/scoringutils/pull/261
- simplify plot_pairwise_comparison() by @nikosbosse in https://github.com/epiforecasts/scoringutils/pull/263
- Make forecast unit clearer by @nikosbosse in https://github.com/epiforecasts/scoringutils/pull/264
- @damonbayer made their first contribution in https://github.com/epiforecasts/scoringutils/pull/249
Full Changelog: https://github.com/epiforecasts/scoringutils/compare/v1.0.0...v1.1.0
Files
epiforecasts/scoringutils-v1.1.0.zip
Additional details
Related works
- Is supplement to
- https://github.com/epiforecasts/scoringutils/tree/v1.1.0 (URL)