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Dataset Open Access

Introduction to bulk RNAseq analysis

Jose Alejandro Romero Herrera

Henrike Zschach; Thilde Bagger Terkelsen; Diana Andrajeva; Adrija Kalvisa

This archive contians datasets, exercises and slides used for the Introduction to bulk RNAseq analysis workshop taught at the University of Copenhagen by the Center for Health Data Science (HeaDS). The course material can be found on Github.

Data.zip contains fastqc and multiqc examples of bulk RNAseq experiments, plus count matrices (both traditional counts and salmon pseudocounts), as well as sample metadata (samplesheet.csv).

Slides.zip contains all the slides used in the workshop.

This is a patch version with updated slides.
Files (149.7 MB)
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  • Kenny PJ, Zhou H, Kim M, Skariah G, Khetani RS, Drnevich J, Arcila ML, Kosik KS, Ceman S. MOV10 and FMRP regulate AGO2 association with microRNA recognition elements. Cell Rep. 2014 Dec 11;9(5):1729-1741. doi: 10.1016/j.celrep.2014.10.054. Epub 2014 Nov 20. PMID: 25464849; PMCID: PMC4268400.

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