Published January 24, 2023
| Version v2023.01.2
Dataset
Open
Introduction to bulk RNAseq analysis
Contributors
- 1. Center for Health Data Science, University of Copenhagen
- 2. reNEW NNF Center for Stem Cell Medicine, Labs and Platforms
Description
This archive contians datasets, exercises and slides used for the Introduction to bulk RNAseq analysis workshop taught at the University of Copenhagen by the Center for Health Data Science (HeaDS). The course material can be found on Github.
Data.zip contains fastqc and multiqc examples of bulk RNAseq experiments, plus count matrices (both traditional counts and salmon pseudocounts), as well as sample metadata (samplesheet.csv).
Slides.zip contains all the slides used in the workshop.
Notes
This is a patch version with updated slides.
Files
Data.zip
Files
(149.7 MB)
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md5:4cbd224c42bb7a52782e90496f3b74bf
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md5:dc43ca0ae0813667cc32116741d9ab27
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Additional details
References
- Kenny PJ, Zhou H, Kim M, Skariah G, Khetani RS, Drnevich J, Arcila ML, Kosik KS, Ceman S. MOV10 and FMRP regulate AGO2 association with microRNA recognition elements. Cell Rep. 2014 Dec 11;9(5):1729-1741. doi: 10.1016/j.celrep.2014.10.054. Epub 2014 Nov 20. PMID: 25464849; PMCID: PMC4268400.