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Published July 29, 2022 | Version v4
Dataset Open

ISDB: In Silico Spectral Databases of Natural Products

  • 1. University of Fribourg
  • 2. University of Illinois at Chicago
  • 3. University of Geneva

Description

An In Silico spectral DataBase (ISDB) of natural products calculated from structures aggregated in the frame of the LOTUS Initiative (https://doi.org/10.7554/eLife.70780).
Fragmented using cfm-predict 4 (https://doi.org/10.1021/acs.analchem.1c01465) .

In silico spectral database preparation and use for dereplication initially described in Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication https://doi.org/10.1021/ACS.ANALCHEM.5B04804

See https://github.com/mandelbrot-project/spectral_lib_builder for associated building scripts.

See https://github.com/mandelbrot-project/spectral_lib_matcher for associated matching scripts.

Files

Files (1.8 GB)

Name Size Download all
md5:45fbc43455eae66f866490e7a8d54e2f
753.3 MB Download
md5:6180d5e992fb3caf87310d13d43b0fee
1.0 GB Download

Additional details

Related works

Is derived from
Dataset: 10.5281/zenodo.6786307 (DOI)