Published January 5, 2023 | Version 1
Dataset Open

Dataset for Efficient, robust, and versatile fluctuation data analysis using MLE MUtation Rate calculator (mlemur)

Authors/Creators

  • 1. Institute of Biochemistry and Biophysics PAS

Contributors

  • 1. Texas A&M University
  • 2. University of Waterloo

Description

This file contains the R and C++ code used for simulating experiments, simulated fluctuation data, and the results of estimations used in the paper "Efficient, robust, and versatile fluctuation data analysis using MLE MUtation Rate calculator (mlemur)".

Notes

Some code used for simulations is based on algorithms written by Qi Zheng and Christian Terry Henderson Barna.

Files

paper_data.zip

Files (463.3 MB)

Name Size
md5:ab5c2f9bd012e08b7d9dad9bede08ced
463.3 MB Preview Download

Additional details

References

  • Q. Zheng, Bull. Math. Biol. 84 (2022) 1–18.
  • C.T.H. Barna, Mutation Rates of Escherichia Coli with Different Balanced Growth Rates: A New Fluctuation Test Protocol and Phenotypic Lag Adjustments, University of Waterloo, Waterloo, Ontario, Canada, 2020.