Published December 8, 2022
| Version v1
Dataset
Open
Vitamin_B12_related_genes_and_FASTA_sequences
Authors/Creators
- 1. Laboratoire d'Océanographie Microbienne (LOMIC – UMR 7621 – CNRS/Sorbonne Université)
- 2. Institut de Ciències del Mar - Marine Biology and Oceanography (ICM Barcelona)
- 3. Laboratoire d'Écogéochimie des Environnements Benthiques (LECOB – UMR 8222 – CNRS/Sorbonne Université)
Description
These two files are related to a submitted research paper on the study of a 7-year metagenomic time series carried monthly in a northwestern Mediterranean coastal site (SOLA, Banyuls-sur-Mer, FRANCE) :
Seasonal succession of different vitamin B12 biosynthesis pathways and producers in coastal marine microbial communities.
This study focuses on prokaryotes involved in vitamin B12 metabolism (biosynthesis, transport, remodeling) and on the metabolic pathways involved in these processes.
The dataset in .xlsx format represents the abundance table of all the genes associated with 82 KEGGs involved in vitamin B12 metabolism, and the file in .fasta format corresponds to the FASTA sequences associated with these genes.
Notes
This research was funded by a doctoral grant from Sorbonne University allocated by the Doctoral School n°129 (Environmental Sciences of Ile-de-France - SEIF - Paris).