Published October 16, 2022
| Version ver2.0
Dataset
Open
Melon pan-genome and multi-parental framework for highresolution trait dissection
Authors/Creators
- 1. Plant Science Institute, Agricultural Research Organization, Newe Ya'ar Research Center, P.O. Box 1021, Ramat Yishay 3009500, Israel
- 2. Plant Science Institute, Agricultural Research Organization, Newe Ya'ar Research Center, P.O. Box 1021, Ramat Yishay 3009500, Israel. The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, The Hebrew University of Jerusalem, Rehovot, Israel.
- 3. Institute for Genomic Diversity, Cornell University, Ithaca, NY 14853, USA
- 4. 4Plant Science Institute, Agricultural Research Organization, The Volcani Center, P.O. Box 15159, Rishon LeZiyyon 7507101, Israe
- 5. Institute for Genomic Diversity, Cornell University, Ithaca, NY 14853, USA. 5United States Department of Agriculture-Agricultural Research Service, Robert W. Holley Center for Agriculture and Health, Ithaca, NY 14853, USA
Description
Gff3 annotation files for 25 de-novo melon genomes discussed in publication.
These are draft annotations based on lif-over from "Harukei-3" and "HS" melon genomes.
Genome fasta files can be found in NCBI PRJNA726743
Files
Files
(187.9 MB)
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Additional details
Related works
- Is described by
- Journal article: 10.1111/tpj.16021 (DOI)
References
- Yano, R., Ariizumi, T., Nonaka, S., Kawazu, Y., Zhong, S., Mueller, L., Giovannoni, J.J., 836 Rose, J.K.C. and Ezura, H. (2020) Comparative genomics of muskmelon reveals a 837 potential role for retrotransposons in the modification of gene expression. Commun. 838 Biol., 3, 1–13.
- Yang, J., Deng, G., Lian, J., Garraway, J., Niu, Y., Hu, Z., Yu, J. and Zhang, M. (2020) 833 The Chromosome-Scale Genome of Melon Dissects Genetic Architecture of Important 834 Agronomic Traits. iScience, 23, 101422