Dataset Open Access
Magnetique: input data and PostgreSQL database
Thiago Britto-Borges;
Annekathrin Ludt;
Etienne Boileau;
Enio Gjerga;
Federico Marini;
Christoph Dieterich
Magnetique: An interactive web application to explore transcriptome signatures of heart failure
Supplementary dataset.
- db_dump.sql.gz: This is a daily [backup-dump](https://www.postgresql.org/docs/current/backup-dump.html) of the Magnetique database obtained on 18.07.2022 and shared for reproducibility purposes
- Other files are required as input for the modeling steps detailed at https://github.com/dieterich-lab/magnetiqueCode2022
Refer to https://shiny.dieterichlab.org/app/magnetique or contact the authors for details.
Files
(2.3 GB)
| Name | Size | |
|---|---|---|
|
db_dump.sql.gz
md5:382582646b99bc90387f5b2303af81ec |
1.3 GB | Download |
|
gene_count_matrix.csv
md5:efad5d4cb9f09603a3a339a12f4d9ccf |
59.7 MB | Download |
|
mage_dedup_metrics_final.txt
md5:168d2d40cd6f1db579358f5468f31851 |
17.9 kB | Download |
|
MAGE_metadata.txt
md5:73561ff4e0e0494164891ab9306664e0 |
122.5 kB | Download |
|
map_SRR_to_pid.csv
md5:2599b5761c2ceaebf482a1ec1f0d8d1f |
15.3 kB | Download |
|
merged_guided.gtf
md5:80e8e1a143f6b2c44f510021f06ea012 |
244.2 MB | Download |
|
phenoData.csv
md5:47abf0897a91c8863a993598a000dab0 |
53.3 kB | Download |
|
transcript_count_matrix.csv
md5:e89518761794f455af67d3c23d83e260 |
625.8 MB | Download |
98
29
views
downloads
| All versions | This version | |
|---|---|---|
| Views | 98 | 48 |
| Downloads | 29 | 28 |
| Data volume | 7.1 GB | 6.0 GB |
| Unique views | 70 | 34 |
| Unique downloads | 12 | 11 |
Indexed in
- Publication date:
- July 18, 2022
- DOI:
-
- Keyword(s):
- Interactive dashboard heart failure cardiomyopathies differential gene expression differential transcript usage protein network inference molecular signatures
- License (for files):
- Creative Commons Attribution 3.0 Germany