Published September 29, 2022
| Version v1
Dataset
Open
ProgressiveMauve alignment of Xanthomonas oryzae pv. oryzae PXO35 assembly variants
Authors/Creators
- 1. Martin Luther University Halle-Wittenberg
- 2. Leibniz Universität Hannover
- 3. Friedrich Schiller University Jena
- 4. Univ Montpellier
- 5. New England Biolabs Inc.
- 6. Robert Koch Institute
Description
Archive containing the alignment of eight assembly variants using different assembly programs and sequencing technologies. This alignment has been produced by the progressiveMauve algorithm (https://doi.org/10.1371/journal.pone.0011147). The main alignment file is "PXO35_assembly_comparison", which can be opened and viewed interactively using the mauve program (https://darlinglab.org/mauve/download.html).
Notes
This work was supported by grants from the Deutsche Forschungsgemeinschaft (http://www.dfg.de) (BO 1496/8-2 to JB, GR 4587/1-2 to JG and FZT 118/2 to SK and MM). Work in RK's laboratory was supported by a grant from the French Agence Nationale de la Recherche (ANR-2010- BLAN-1723). MM and SK were supported by the Ministry for Economics, Sciences and Digital Society of Thuringia (TMWWDG), under the framework of the Landesprogramm ProDigital (DigLeben-5575/10-9).