Dataset Open Access
HippUnfold HCP-YA Training Data
Dekraker, Jordan;
Khan, Ali
Hippocampal Tissue segmentations, T1w, T2w, and mean DWI b1000 images in upsampled 0.3mm left and right bounding boxes around the hippocampus. Subjects are from the HCP-1200 Young Adult dataset. These data were used to train the current HippUnfold U-net segmentation models.
Unzip all the zip files, folders will be created for the labelmaps, T1w, T2w, and b1000 images for each hemisphere and subject. Left hipp labels are already L-R flipped to the right side.
Labelmap lookup table:
index name abbreviation 1 hippocampal grey matter GM 2 SRLM or 'dark band' SRLM 3 neocortex (entorhinal or parahippocampal) MTLC 4 pial surface Pial 5 hippocampal-amygdalar transition area HATA 6 indusium griseum IndGris 7 cysts Cyst 8 dentate gyrus DG
Files
(52.3 GB)
91
4
views
downloads
| All versions | This version | |
|---|---|---|
| Views | 91 | 91 |
| Downloads | 4 | 4 |
| Data volume | 9.6 GB | 9.6 GB |
| Unique views | 80 | 80 |
| Unique downloads | 1 | 1 |
Indexed in
- Publication date:
- August 18, 2022
- DOI:
-
- Keyword(s):
- Hippocampus, HippUnfold Training Segmentation
- Published in:
- bioRxiv: 2021.12.03.471134.
- License (for files):
- Creative Commons Attribution 4.0 International