Published August 17, 2022
| Version v3
Dataset
Open
4 image lysozyme dataset recorded on the Jungfrau 16M detector at SwissFEL and formatted as a NeXus file
Authors/Creators
- 1. LBL
- 2. PSI
- 3. Ronin Institute
Description
This is a 4 image lysozyme datasets derived from https://doi.org/10.5281/zenodo.3352357. The specific 4 images are able to be processed by the software package DIALS using commands in the linked dataset above. The images were rounded to integer and compressed to save file space using this script:
import shutil, h5py
import numpy as np
shutil.copyfile('../lyso009a_0087.JF07T32V01_master.h5', 'lyso009a_0087.JF07T32V01_master_4img.h5')
h5 = h5py.File('lyso009a_0087.JF07T32V01_master_4img.h5', 'r+')
data = h5["entry/data/data"][()]
del h5["entry/data/data"]
h = h5["entry/data"]
subset = data[5:9].astype(np.int32)
h.create_dataset("data", subset.shape, subset.dtype, subset, compression="gzip", compression_opts=9)
h5.close()
The .expt file was created by dials.import and is useful for regression testing in DIALS.
Files
Files
(95.6 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:f0745b78f4980353a246ada24ba661c0
|
94.9 MB | Download |
|
md5:2dbb446f7e5667d346f5d944ba29e5ff
|
702.1 kB | Download |
Additional details
Related works
- Is derived from
- Dataset: 10.5281/zenodo.3352357 (DOI)
References
- Bernstein HJ et. al (2020). "Gold Standard for macromolecular crystallography diffraction data." IUCrJ 7, 784-792.