Published August 9, 2022
| Version v1
Dataset
Open
datasets for USEARCH SINTAX classifier used in dix-seq
Authors/Creators
Description
1. datasets
The datasets include : rdp_16s_v18_sp, PR2_4.14 and unite_10.05.2021
2. USERACH formatdb
../binaries/usearch -makeudb_usearch rdp_16s_v18_sp.fasta -output rdp_16s_v18_sp.udb
../binaries/usearch -makeudb_usearch PR2_4.14.fasta -output PR2_4.14.udb
../binaries/usearch -makeudb_usearch unite_10.05.2021.fasta -output unite_10.05.2021.udb
3. Preprint
Dix-seq: An integrated pipeline for fast amplicon data analysis
Yongjun wei, Tianqi Ren, Lei Zhang
bioRxiv 2020.05.11.089748; doi: https://doi.org/10.1101/2020.05.11.089748