Published July 20, 2022
| Version v2
Dataset
Open
PSFcheck ring pattern at various SNR
Authors/Creators
- 1. Laboratorio Nacional de Microscopía Avanzada, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico
Description
The imaged PSFcheck pattern consists of a nanometric set of ring-like laser-written structures with a separation of 10 µm between each. The mean FWHM of these patterns was calculated to be 208 nm. A NanoImager-S microscope (ONI, Oxford Nanoimaging), equipped with a 100X 1.4 NA, oil-immersion objective (Olympus) was used to image the PSFcheck patterns in widefield fluorescence mode. Sample excitation was provided by a 561 nm laser and emission was collected with a 575-616.5 emission filter. A sCMOS sensor (Hamamatsu, Orca-0Flash4.0 V3) was used for image aquisition at 30 fps and 117 nm pixel size.
Notes
Three files are provided. 'Raw PSFcheck pattern' corresponds to the imaged sample with the intensity displayed as gray levels. 'Photons PSFcheck pattern' displays the intensity as the number of detected photons during image acquisition (see Methods section of the article associated to this dataset). 'ACsN-corrected PSFcheck pattern' contains the ring pattern images after noise correction with the ACsN algorithm [1].
1. Mandracchia, B., Hua, X., Guo, C. et al. Fast and accurate sCMOS noise correction for fluorescence microscopy. Nat Commun 11, 94 (2020).
Files
ACsN-corrected PSFcheck pattern.zip
Additional details
Related works
- Is described by
- Journal article: 10.1364/OE.26.021887 (DOI)
- Is published in
- Preprint: 10.21203/rs.3.rs-984659/v1 (DOI)
- Preprint: 10.1101/2021.10.17.464398 (DOI)
- Is referenced by
- Software: 10.5281/zenodo.6836636 (DOI)
References
- Alexander D. Corbett, Michael Shaw, Andrew Yacoot, Andrew Jefferson, Lothar Schermelleh, Tony Wilson, Martin Booth, and Patrick S. Salter, "Microscope calibration using laser written fluorescence," Opt. Express 26, 21887-21899 (2018)