Published July 27, 2022 | Version v1
Dataset Open

Molecular dynamics dataset of Synaptotagmin-1

  • 1. Freie Universität Berlin

Description

This dataset contains all-atom molecular dynamics trajectories of synaptotagmin-1 C2A (calcium free). Each trajectory is 2 µs long and the total cumulated simulation time is 184 µs. Details, including the molecular dynamics setup, are given in Hempel, T.; Plattner, N.; Noé, F. Coupling of Conformational Switches in Calcium Sensor Unraveled with Local Markov Models and Transfer Entropy. J. Chem. Theory Comput. 202016 (4), 2584–2593. https://doi.org/10.1021/acs.jctc.0c00043.

Files

Files (14.7 GB)

Name Size Download all
md5:bac29fbe9a44e25260d58fdd91e3aae3
14.7 GB Download

Additional details

References

  • Hempel, T.; Plattner, N.; Noé, F. Coupling of Conformational Switches in Calcium Sensor Unraveled with Local Markov Models and Transfer Entropy. J. Chem. Theory Comput. 2020, 16 (4), 2584–2593. https://doi.org/10.1021/acs.jctc.0c00043.