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Published July 12, 2022 | Version 0.1.0.1

Tutorial datasets for Dictys

  • 1. Massachusetts General Hospital
  • 2. Massachusetts General Hospital, Imperial College London

Description

This includes several tutorial datasets for Dictys' the three stages of dynamic gene regulatory network inference and analysis: trajectory inference, network inference, and network analysis. Dictys can be found at https://github.com/pinellolab/dictys. See README.md for usage. More tutorial datasets will be added.

Files

README.md

Files (3.5 GB)

Name Size
md5:af61b67a63242150ebd5da0024c0cc9f
293.2 MB Download
md5:45b880d281af29ded5c91abd84064232
2.1 GB Download
md5:dcc5bc25d4dc54773c3b1b6c823e76be
1.1 GB Download
md5:ad3c543d3e30111fd44cd90462f54c94
13.9 kB Preview Download
md5:986afe49b2fa427405f1976d3e8db5f2
615.1 kB Download
md5:c4245393f24079f5da9c902e64fc92cc
178.8 kB Download

Additional details

Related works

Is derived from
Journal article: 10.1038/s41587-019-0332-7 (DOI)
Journal article: 10.1016/j.cell.2020.09.056 (DOI)
Is supplement to
Software: https://github.com/pinellolab/dictys (URL)
Requires
Software: https://github.com/pinellolab/dictys (URL)