Therapeutic targeting of ATR in alveolar rhabdomyosarcoma

Data related to the manuscript "Therapeutic targeting of ATR in alveolar rhabdomyosarcoma"

It can be divided in three parts

Raw data from the phosphoproteomics screen (Raw data phosphoprot.7z)

Inside contains the following files:
Phosphopeptides in three replicates:

• Waldorf_20170621_KI_HS_314_phospho_1_L-ctrl_H-inh_NH4OH.raw
• Waldorf_20170621_KI_HS_314_phospho_1_L-ctrl_H-inh_pipe.raw
• Waldorf_20170621_KI_HS_314_phospho_2_L-ctrl_H-inh_NH4OH.raw
• Waldorf_20170621_KI_HS_314_phospho_2_L-ctrl_H-inh_pipe.raw
• Waldorf_20170621_KI_HS_314_phospho_3_L-inh_H-ctrl_NH4OH.raw
• Waldorf_20170621_KI_HS_314_phospho_3_L-inh_H-ctrl_pipe.raw

Total proteome (three replicates):

• Waldorf_20170621_KI_HS_314_whole_1.raw
• Waldorf_20170621_KI_HS_314_whole_2.raw
• Waldorf_20170621_KI_HS_314_whole_3.raw

Raw data from the CRISPRa screen (CRISPR.7z)

Inside contains the following files:

• (control sample) flexbarOut_barcode_DMSO.fastq
• (treated sample) flexbarOut_barcode_AZD6738.fastq

Raw data from the RNAseq experiment (RNAseq.7z)

Inside contains the following files (NOTE: paired-end sequencing):

• (control sample) AH_HDG_1_S1_R1_001.fastq
• (control sample) AH_HDG_1_S1_R2_001.fastq
• (treated sample) AH_HDG_2_S2_R1_001.fastq
• (treated sample) AH_HDG_2_S2_R2_001.fastq
• (control sample) AH_HDG_3_S3_R1_001.fastq
• (control sample) AH_HDG_3_S3_R2_001.fastq
• (treated sample) AH_HDG_4_S4_R1_001.fastq
• (treated sample) AH_HDG_4_S4_R2_001.fastq
• (control sample) AH_YB_027_S7_R1_001.fastq
• (control sample) AH_YB_027_S7_R2_001.fastq
• AH_YB_028_S8_R1_001.fastq
• AH_YB_028_S8_R2_001.fastq